Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACM6AB_RS05560 | Genome accession | NZ_CP181140 |
| Coordinates | 1127369..1127839 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain AG21-0599 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1117958..1161642 | 1127369..1127839 | within | 0 |
Gene organization within MGE regions
Location: 1117958..1161642
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM6AB_RS05475 (ACM6AB_05475) | - | 1117958..1119343 (-) | 1386 | WP_416152936.1 | recombinase family protein | - |
| ACM6AB_RS05480 (ACM6AB_05480) | - | 1119550..1119672 (-) | 123 | WP_001077637.1 | hypothetical protein | - |
| ACM6AB_RS05485 (ACM6AB_05485) | - | 1119693..1120154 (-) | 462 | WP_000525016.1 | hypothetical protein | - |
| ACM6AB_RS05490 (ACM6AB_05490) | - | 1120167..1120490 (-) | 324 | WP_001260487.1 | helix-turn-helix domain-containing protein | - |
| ACM6AB_RS05495 (ACM6AB_05495) | - | 1120654..1120902 (+) | 249 | WP_000272858.1 | helix-turn-helix domain-containing protein | - |
| ACM6AB_RS05500 (ACM6AB_05500) | - | 1120917..1121078 (+) | 162 | WP_001153175.1 | hypothetical protein | - |
| ACM6AB_RS05505 (ACM6AB_05505) | - | 1121071..1121307 (-) | 237 | WP_000856472.1 | hypothetical protein | - |
| ACM6AB_RS05510 (ACM6AB_05510) | - | 1121372..1122115 (+) | 744 | WP_001148623.1 | phage antirepressor KilAC domain-containing protein | - |
| ACM6AB_RS05515 (ACM6AB_05515) | - | 1122291..1122521 (-) | 231 | WP_000395455.1 | hypothetical protein | - |
| ACM6AB_RS05520 (ACM6AB_05520) | - | 1122580..1122708 (+) | 129 | WP_001559112.1 | hypothetical protein | - |
| ACM6AB_RS05525 (ACM6AB_05525) | - | 1122701..1122862 (+) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| ACM6AB_RS05530 (ACM6AB_05530) | - | 1122957..1123259 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| ACM6AB_RS05535 (ACM6AB_05535) | - | 1123264..1123524 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| ACM6AB_RS05540 (ACM6AB_05540) | - | 1123533..1123796 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACM6AB_RS05545 (ACM6AB_05545) | - | 1123805..1125748 (+) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| ACM6AB_RS05550 (ACM6AB_05550) | - | 1125750..1126670 (+) | 921 | WP_000180600.1 | recombinase RecT | - |
| ACM6AB_RS05555 (ACM6AB_05555) | - | 1126751..1127368 (+) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| ACM6AB_RS05560 (ACM6AB_05560) | ssbA | 1127369..1127839 (+) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| ACM6AB_RS05565 (ACM6AB_05565) | - | 1127869..1128762 (+) | 894 | WP_000148333.1 | DnaD domain protein | - |
| ACM6AB_RS05570 (ACM6AB_05570) | - | 1128769..1128987 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| ACM6AB_RS05575 (ACM6AB_05575) | - | 1128996..1129400 (+) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACM6AB_RS05580 (ACM6AB_05580) | - | 1129413..1129781 (+) | 369 | WP_000101274.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACM6AB_RS05585 (ACM6AB_05585) | - | 1129785..1130027 (+) | 243 | WP_000131363.1 | SAV1978 family virulence-associated passenger protein | - |
| ACM6AB_RS05590 (ACM6AB_05590) | - | 1130042..1130248 (+) | 207 | WP_000693989.1 | hypothetical protein | - |
| ACM6AB_RS05595 (ACM6AB_05595) | - | 1130251..1130652 (+) | 402 | WP_000695757.1 | hypothetical protein | - |
| ACM6AB_RS05600 (ACM6AB_05600) | - | 1130649..1130996 (+) | 348 | WP_000979209.1 | YopX family protein | - |
| ACM6AB_RS05605 (ACM6AB_05605) | - | 1130993..1131301 (+) | 309 | WP_000144711.1 | hypothetical protein | - |
| ACM6AB_RS05610 (ACM6AB_05610) | - | 1131294..1131529 (+) | 236 | Protein_1098 | DUF1024 family protein | - |
| ACM6AB_RS05615 (ACM6AB_05615) | - | 1131534..1132064 (+) | 531 | WP_031807946.1 | dUTP diphosphatase | - |
| ACM6AB_RS05620 (ACM6AB_05620) | - | 1132101..1132307 (+) | 207 | WP_000195835.1 | DUF1381 domain-containing protein | - |
| ACM6AB_RS05625 (ACM6AB_05625) | - | 1132304..1132690 (+) | 387 | WP_000592205.1 | hypothetical protein | - |
| ACM6AB_RS05630 (ACM6AB_05630) | rinB | 1132687..1132860 (+) | 174 | WP_000595235.1 | transcriptional activator RinB | - |
| ACM6AB_RS05635 (ACM6AB_05635) | - | 1132861..1133226 (+) | 366 | WP_000989954.1 | hypothetical protein | - |
| ACM6AB_RS05640 (ACM6AB_05640) | - | 1133227..1133373 (+) | 147 | WP_000989960.1 | hypothetical protein | - |
| ACM6AB_RS05645 (ACM6AB_05645) | - | 1133397..1133819 (+) | 423 | WP_000162696.1 | RinA family phage transcriptional activator | - |
| ACM6AB_RS05650 (ACM6AB_05650) | - | 1134006..1134446 (+) | 441 | WP_001003271.1 | terminase small subunit | - |
| ACM6AB_RS05655 (ACM6AB_05655) | - | 1134433..1135710 (+) | 1278 | WP_000169946.1 | PBSX family phage terminase large subunit | - |
| ACM6AB_RS05660 (ACM6AB_05660) | - | 1135721..1137259 (+) | 1539 | WP_000909977.1 | phage portal protein | - |
| ACM6AB_RS05665 (ACM6AB_05665) | - | 1137266..1138261 (+) | 996 | WP_001133044.1 | minor capsid protein | - |
| ACM6AB_RS05670 (ACM6AB_05670) | - | 1138334..1138504 (+) | 171 | WP_000072208.1 | hypothetical protein | - |
| ACM6AB_RS05675 (ACM6AB_05675) | - | 1138532..1138619 (+) | 88 | Protein_1111 | hypothetical protein | - |
| ACM6AB_RS05680 (ACM6AB_05680) | - | 1138613..1139233 (+) | 621 | WP_000392151.1 | DUF4355 domain-containing protein | - |
| ACM6AB_RS05685 (ACM6AB_05685) | - | 1139247..1140221 (+) | 975 | WP_015977968.1 | phage major capsid protein | - |
| ACM6AB_RS05690 (ACM6AB_05690) | - | 1140243..1140530 (+) | 288 | WP_001114086.1 | hypothetical protein | - |
| ACM6AB_RS05695 (ACM6AB_05695) | - | 1140539..1140871 (+) | 333 | WP_416152937.1 | phage head-tail connector protein | - |
| ACM6AB_RS05700 (ACM6AB_05700) | - | 1140868..1141170 (+) | 303 | WP_001268312.1 | hypothetical protein | - |
| ACM6AB_RS05705 (ACM6AB_05705) | - | 1141170..1141517 (+) | 348 | WP_001017815.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| ACM6AB_RS05710 (ACM6AB_05710) | - | 1141529..1141912 (+) | 384 | WP_000188643.1 | hypothetical protein | - |
| ACM6AB_RS05715 (ACM6AB_05715) | - | 1141931..1142512 (+) | 582 | WP_000002577.1 | phage major tail protein, TP901-1 family | - |
| ACM6AB_RS05720 (ACM6AB_05720) | - | 1142574..1142939 (+) | 366 | WP_001100161.1 | tail assembly chaperone | - |
| ACM6AB_RS05725 (ACM6AB_05725) | - | 1142969..1143313 (+) | 345 | WP_000105584.1 | hypothetical protein | - |
| ACM6AB_RS05730 (ACM6AB_05730) | - | 1143330..1146794 (+) | 3465 | WP_416152938.1 | hypothetical protein | - |
| ACM6AB_RS05735 (ACM6AB_05735) | - | 1146807..1147754 (+) | 948 | WP_000350675.1 | phage tail family protein | - |
| ACM6AB_RS05740 (ACM6AB_05740) | - | 1147763..1149664 (+) | 1902 | WP_000152714.1 | SGNH/GDSL hydrolase family protein | - |
| ACM6AB_RS05745 (ACM6AB_05745) | - | 1149679..1151589 (+) | 1911 | WP_000369017.1 | hypothetical protein | - |
| ACM6AB_RS05750 (ACM6AB_05750) | - | 1151589..1153412 (+) | 1824 | WP_000259619.1 | phage baseplate upper protein | - |
| ACM6AB_RS05755 (ACM6AB_05755) | - | 1153412..1153789 (+) | 378 | WP_000705910.1 | DUF2977 domain-containing protein | - |
| ACM6AB_RS05760 (ACM6AB_05760) | - | 1153799..1153972 (+) | 174 | WP_015990323.1 | XkdX family protein | - |
| ACM6AB_RS05765 (ACM6AB_05765) | - | 1154013..1154312 (+) | 300 | WP_000466778.1 | DUF2951 domain-containing protein | - |
| ACM6AB_RS05770 (ACM6AB_05770) | - | 1154449..1156347 (+) | 1899 | WP_001628105.1 | glucosaminidase domain-containing protein | - |
| ACM6AB_RS05775 (ACM6AB_05775) | - | 1156360..1157598 (+) | 1239 | WP_001624558.1 | BppU family phage baseplate upper protein | - |
| ACM6AB_RS05780 (ACM6AB_05780) | - | 1157604..1157999 (+) | 396 | WP_000398878.1 | hypothetical protein | - |
| ACM6AB_RS05785 (ACM6AB_05785) | - | 1158055..1158492 (+) | 438 | WP_000354132.1 | phage holin | - |
| ACM6AB_RS05790 (ACM6AB_05790) | - | 1158473..1159918 (+) | 1446 | WP_001148130.1 | SH3 domain-containing protein | - |
| ACM6AB_RS05795 (ACM6AB_05795) | - | 1160324..1160986 (+) | 663 | WP_000385047.1 | hypothetical protein | - |
| ACM6AB_RS05800 (ACM6AB_05800) | - | 1161001..1161642 (+) | 642 | WP_001190816.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1098948 ACM6AB_RS05560 WP_000934759.1 1127369..1127839(+) (ssbA) [Staphylococcus aureus strain AG21-0599]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1098948 ACM6AB_RS05560 WP_000934759.1 1127369..1127839(+) (ssbA) [Staphylococcus aureus strain AG21-0599]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |