Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACM6AD_RS10570 | Genome accession | NZ_CP181138 |
| Coordinates | 2108371..2108841 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain AG21-0601 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2079390..2132909 | 2108371..2108841 | within | 0 |
Gene organization within MGE regions
Location: 2079390..2132909
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM6AD_RS10360 (ACM6AD_10360) | scn | 2079390..2079740 (-) | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| ACM6AD_RS10365 (ACM6AD_10365) | - | 2080425..2080874 (+) | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| ACM6AD_RS10370 (ACM6AD_10370) | - | 2080969..2081307 (-) | 339 | Protein_2008 | SH3 domain-containing protein | - |
| ACM6AD_RS10375 (ACM6AD_10375) | sak | 2081954..2082445 (-) | 492 | WP_000919350.1 | staphylokinase | - |
| ACM6AD_RS10380 (ACM6AD_10380) | - | 2082636..2083391 (-) | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| ACM6AD_RS10385 (ACM6AD_10385) | - | 2083403..2083657 (-) | 255 | WP_000611512.1 | phage holin | - |
| ACM6AD_RS10390 (ACM6AD_10390) | - | 2083709..2083816 (+) | 108 | WP_001791821.1 | hypothetical protein | - |
| ACM6AD_RS10395 (ACM6AD_10395) | pepG1 | 2083869..2084003 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| ACM6AD_RS10400 (ACM6AD_10400) | - | 2084195..2084491 (-) | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| ACM6AD_RS10405 (ACM6AD_10405) | - | 2084549..2084836 (-) | 288 | WP_001040261.1 | hypothetical protein | - |
| ACM6AD_RS10410 (ACM6AD_10410) | - | 2084883..2085035 (-) | 153 | WP_001153681.1 | hypothetical protein | - |
| ACM6AD_RS10415 (ACM6AD_10415) | - | 2085025..2088810 (-) | 3786 | WP_000582154.1 | phage tail spike protein | - |
| ACM6AD_RS10420 (ACM6AD_10420) | - | 2088826..2090310 (-) | 1485 | WP_000567396.1 | phage distal tail protein | - |
| ACM6AD_RS10425 (ACM6AD_10425) | - | 2090307..2094839 (-) | 4533 | WP_001557459.1 | phage tail tape measure protein | - |
| ACM6AD_RS10430 (ACM6AD_10430) | gpGT | 2094896..2095033 (-) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| ACM6AD_RS10435 (ACM6AD_10435) | gpG | 2095084..2095434 (-) | 351 | WP_001096355.1 | phage tail assembly chaperone G | - |
| ACM6AD_RS10440 (ACM6AD_10440) | - | 2095484..2095714 (-) | 231 | Protein_2022 | Ig-like domain-containing protein | - |
| ACM6AD_RS10445 (ACM6AD_10445) | - | 2095750..2096394 (-) | 645 | WP_000985142.1 | major tail protein | - |
| ACM6AD_RS10450 (ACM6AD_10450) | - | 2096395..2096802 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| ACM6AD_RS10455 (ACM6AD_10455) | - | 2096799..2097203 (-) | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| ACM6AD_RS10460 (ACM6AD_10460) | - | 2097200..2097562 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| ACM6AD_RS10465 (ACM6AD_10465) | - | 2097546..2097830 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| ACM6AD_RS10470 (ACM6AD_10470) | - | 2097820..2098104 (-) | 285 | WP_000238241.1 | hypothetical protein | - |
| ACM6AD_RS10475 (ACM6AD_10475) | - | 2098124..2099269 (-) | 1146 | WP_000154568.1 | phage major capsid protein | - |
| ACM6AD_RS10480 (ACM6AD_10480) | - | 2099292..2100029 (-) | 738 | WP_000861911.1 | head maturation protease, ClpP-related | - |
| ACM6AD_RS10485 (ACM6AD_10485) | - | 2100013..2101176 (-) | 1164 | WP_000025268.1 | phage portal protein | - |
| ACM6AD_RS10490 (ACM6AD_10490) | - | 2101192..2102853 (-) | 1662 | WP_000625096.1 | terminase large subunit | - |
| ACM6AD_RS10495 (ACM6AD_10495) | - | 2102850..2103194 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| ACM6AD_RS10500 (ACM6AD_10500) | - | 2103325..2103624 (-) | 300 | WP_000988332.1 | HNH endonuclease | - |
| ACM6AD_RS10505 (ACM6AD_10505) | - | 2103856..2104272 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| ACM6AD_RS10510 (ACM6AD_10510) | - | 2104300..2104500 (-) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| ACM6AD_RS10515 (ACM6AD_10515) | rinB | 2104500..2104649 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ACM6AD_RS10520 (ACM6AD_10520) | - | 2104646..2104852 (-) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| ACM6AD_RS10525 (ACM6AD_10525) | - | 2104849..2105094 (-) | 246 | WP_001282077.1 | hypothetical protein | - |
| ACM6AD_RS10530 (ACM6AD_10530) | - | 2105131..2105667 (-) | 537 | WP_000185693.1 | dUTPase | - |
| ACM6AD_RS10535 (ACM6AD_10535) | - | 2105664..2105909 (-) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| ACM6AD_RS10540 (ACM6AD_10540) | - | 2105924..2106166 (-) | 243 | WP_000221877.1 | SAV1978 family virulence-associated passenger protein | - |
| ACM6AD_RS10545 (ACM6AD_10545) | - | 2106169..2106426 (-) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| ACM6AD_RS10550 (ACM6AD_10550) | - | 2106426..2106797 (-) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACM6AD_RS10555 (ACM6AD_10555) | - | 2106810..2107214 (-) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACM6AD_RS10560 (ACM6AD_10560) | - | 2107223..2107441 (-) | 219 | WP_000338528.1 | hypothetical protein | - |
| ACM6AD_RS10565 (ACM6AD_10565) | - | 2107448..2108341 (-) | 894 | WP_000148333.1 | DnaD domain protein | - |
| ACM6AD_RS10570 (ACM6AD_10570) | ssbA | 2108371..2108841 (-) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| ACM6AD_RS10575 (ACM6AD_10575) | - | 2108842..2109459 (-) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| ACM6AD_RS10580 (ACM6AD_10580) | - | 2109540..2110460 (-) | 921 | WP_000180600.1 | recombinase RecT | - |
| ACM6AD_RS10585 (ACM6AD_10585) | - | 2110462..2112405 (-) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| ACM6AD_RS10590 (ACM6AD_10590) | - | 2112414..2112677 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACM6AD_RS10595 (ACM6AD_10595) | - | 2112686..2112946 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| ACM6AD_RS10600 (ACM6AD_10600) | - | 2112951..2113253 (-) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| ACM6AD_RS10605 (ACM6AD_10605) | - | 2113348..2113509 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| ACM6AD_RS10610 (ACM6AD_10610) | - | 2113506..2113829 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| ACM6AD_RS10615 (ACM6AD_10615) | - | 2113884..2114264 (+) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| ACM6AD_RS10620 (ACM6AD_10620) | - | 2114251..2114448 (-) | 198 | WP_001148862.1 | hypothetical protein | - |
| ACM6AD_RS10625 (ACM6AD_10625) | - | 2114464..2115213 (-) | 750 | WP_001148338.1 | phage antirepressor KilAC domain-containing protein | - |
| ACM6AD_RS10630 (ACM6AD_10630) | - | 2115270..2115479 (+) | 210 | WP_000772137.1 | hypothetical protein | - |
| ACM6AD_RS10635 (ACM6AD_10635) | - | 2115472..2115612 (-) | 141 | WP_000939495.1 | hypothetical protein | - |
| ACM6AD_RS10640 (ACM6AD_10640) | - | 2115627..2116070 (-) | 444 | WP_000435360.1 | hypothetical protein | - |
| ACM6AD_RS10645 (ACM6AD_10645) | - | 2116083..2116325 (-) | 243 | WP_000639923.1 | DUF739 family protein | - |
| ACM6AD_RS10650 (ACM6AD_10650) | - | 2116489..2117205 (+) | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| ACM6AD_RS10655 (ACM6AD_10655) | - | 2117217..2118071 (+) | 855 | WP_001557601.1 | HIRAN domain-containing protein | - |
| ACM6AD_RS10660 (ACM6AD_10660) | - | 2118145..2118291 (+) | 147 | WP_000345949.1 | hypothetical protein | - |
| ACM6AD_RS10665 (ACM6AD_10665) | - | 2118288..2118473 (+) | 186 | WP_000109189.1 | hypothetical protein | - |
| ACM6AD_RS10670 (ACM6AD_10670) | - | 2118544..2118726 (+) | 183 | WP_000705245.1 | hypothetical protein | - |
| ACM6AD_RS10675 (ACM6AD_10675) | - | 2118805..2119518 (+) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| ACM6AD_RS10680 (ACM6AD_10680) | - | 2119709..2120746 (+) | 1038 | WP_000857200.1 | tyrosine-type recombinase/integrase | - |
| ACM6AD_RS10685 (ACM6AD_10685) | sph | 2120803..2121627 (+) | 825 | Protein_2071 | sphingomyelin phosphodiesterase | - |
| ACM6AD_RS10690 (ACM6AD_10690) | lukG | 2121865..2122881 (-) | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| ACM6AD_RS10695 (ACM6AD_10695) | lukH | 2122903..2123958 (-) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| ACM6AD_RS10700 (ACM6AD_10700) | - | 2124394..2125617 (+) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| ACM6AD_RS10705 (ACM6AD_10705) | - | 2126061..2127368 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| ACM6AD_RS10710 (ACM6AD_10710) | groL | 2127908..2129524 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| ACM6AD_RS10715 (ACM6AD_10715) | groES | 2129600..2129884 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| ACM6AD_RS10720 (ACM6AD_10720) | mroQ | 2130059..2130802 (+) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| ACM6AD_RS10725 (ACM6AD_10725) | - | 2130827..2132086 (-) | 1260 | WP_000120297.1 | SdrH family protein | - |
| ACM6AD_RS10730 (ACM6AD_10730) | - | 2132283..2132909 (+) | 627 | WP_000522381.1 | nitroreductase family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1098926 ACM6AD_RS10570 WP_000934759.1 2108371..2108841(-) (ssbA) [Staphylococcus aureus strain AG21-0601]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1098926 ACM6AD_RS10570 WP_000934759.1 2108371..2108841(-) (ssbA) [Staphylococcus aureus strain AG21-0601]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |