Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACM6AQ_RS01575 | Genome accession | NZ_CP181136 |
| Coordinates | 350246..350749 (+) | Length | 167 a.a. |
| NCBI ID | WP_000934799.1 | Uniprot ID | A0A7U7IE99 |
| Organism | Staphylococcus aureus strain AG21-0619 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 346186..388965 | 350246..350749 | within | 0 |
Gene organization within MGE regions
Location: 346186..388965
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM6AQ_RS01545 (ACM6AQ_01545) | - | 346186..347031 (+) | 846 | WP_072490958.1 | ParB/RepB/Spo0J family partition protein | - |
| ACM6AQ_RS01550 (ACM6AQ_01550) | - | 347185..348066 (+) | 882 | WP_000373075.1 | mechanosensitive ion channel family protein | - |
| ACM6AQ_RS01555 (ACM6AQ_01555) | - | 348096..348299 (+) | 204 | WP_000157348.1 | DUF951 domain-containing protein | - |
| ACM6AQ_RS01560 (ACM6AQ_01560) | ychF | 348311..349408 (+) | 1098 | WP_001218732.1 | redox-regulated ATPase YchF | - |
| ACM6AQ_RS01565 (ACM6AQ_01565) | - | 349494..349685 (-) | 192 | WP_001052483.1 | hypothetical protein | - |
| ACM6AQ_RS01570 (ACM6AQ_01570) | rpsF | 349929..350225 (+) | 297 | WP_001261460.1 | 30S ribosomal protein S6 | - |
| ACM6AQ_RS01575 (ACM6AQ_01575) | ssbA | 350246..350749 (+) | 504 | WP_000934799.1 | single-stranded DNA-binding protein | Machinery gene |
| ACM6AQ_RS01580 (ACM6AQ_01580) | rpsR | 350801..351043 (+) | 243 | WP_000897044.1 | 30S ribosomal protein S18 | - |
| ACM6AQ_RS01585 (ACM6AQ_01585) | - | 351282..352181 (-) | 900 | WP_001797289.1 | Abi family protein | - |
| ACM6AQ_RS01590 (ACM6AQ_01590) | - | 352183..353392 (-) | 1210 | Protein_315 | tyrosine-type recombinase/integrase | - |
| ACM6AQ_RS01595 (ACM6AQ_01595) | - | 353418..354341 (-) | 924 | WP_050436923.1 | helix-turn-helix domain-containing protein | - |
| ACM6AQ_RS01600 (ACM6AQ_01600) | - | 354448..354648 (+) | 201 | WP_001033058.1 | helix-turn-helix transcriptional regulator | - |
| ACM6AQ_RS01605 (ACM6AQ_01605) | - | 354687..354899 (+) | 213 | WP_033863184.1 | helix-turn-helix domain-containing protein | - |
| ACM6AQ_RS01610 (ACM6AQ_01610) | - | 354900..355172 (+) | 273 | WP_001138301.1 | helix-turn-helix domain-containing protein | - |
| ACM6AQ_RS01615 (ACM6AQ_01615) | - | 355184..355330 (+) | 147 | WP_000784873.1 | hypothetical protein | - |
| ACM6AQ_RS01620 (ACM6AQ_01620) | tscA | 355323..355532 (+) | 210 | WP_001058490.1 | type II toxin-antitoxin system antitoxin TscA | - |
| ACM6AQ_RS01625 (ACM6AQ_01625) | tscT | 355535..355840 (+) | 306 | WP_033863183.1 | type II toxin-antitoxin system toxin TscT | - |
| ACM6AQ_RS01630 (ACM6AQ_01630) | - | 355915..357528 (+) | 1614 | WP_416152844.1 | phage resistance protein | - |
| ACM6AQ_RS01635 (ACM6AQ_01635) | - | 357699..358502 (+) | 804 | WP_033863177.1 | bifunctional DNA primase/polymerase | - |
| ACM6AQ_RS01640 (ACM6AQ_01640) | - | 358489..358761 (+) | 273 | WP_001149387.1 | hypothetical protein | - |
| ACM6AQ_RS01645 (ACM6AQ_01645) | - | 358763..359404 (+) | 642 | WP_072490956.1 | pathogenicity island protein | - |
| ACM6AQ_RS01650 (ACM6AQ_01650) | - | 359853..360194 (+) | 342 | WP_001190614.1 | hypothetical protein | - |
| ACM6AQ_RS01655 (ACM6AQ_01655) | - | 360225..360878 (+) | 654 | WP_000214171.1 | hypothetical protein | - |
| ACM6AQ_RS01660 (ACM6AQ_01660) | - | 360931..361458 (+) | 528 | WP_000771364.1 | spore coat protein | - |
| ACM6AQ_RS01665 (ACM6AQ_01665) | - | 361590..361802 (+) | 213 | WP_025174984.1 | hypothetical protein | - |
| ACM6AQ_RS01670 (ACM6AQ_01670) | - | 361799..362368 (+) | 570 | WP_001293066.1 | terminase small subunit | - |
| ACM6AQ_RS01675 (ACM6AQ_01675) | - | 362797..363315 (+) | 519 | WP_000624990.1 | hypothetical protein | - |
| ACM6AQ_RS01680 (ACM6AQ_01680) | - | 363312..363740 (+) | 429 | WP_000591858.1 | hypothetical protein | - |
| ACM6AQ_RS01685 (ACM6AQ_01685) | - | 364113..364505 (+) | 393 | WP_017431599.1 | hypothetical protein | - |
| ACM6AQ_RS01690 (ACM6AQ_01690) | - | 364742..364969 (+) | 228 | WP_033863179.1 | hypothetical protein | - |
| ACM6AQ_RS01695 (ACM6AQ_01695) | - | 365041..365139 (+) | 99 | Protein_336 | hypothetical protein | - |
| ACM6AQ_RS01700 (ACM6AQ_01700) | - | 366032..366970 (-) | 939 | WP_072491317.1 | Abi family protein | - |
| ACM6AQ_RS01705 (ACM6AQ_01705) | - | 367021..367715 (-) | 695 | Protein_338 | tyrosine-type recombinase/integrase | - |
| ACM6AQ_RS01710 (ACM6AQ_01710) | selX | 367921..368532 (+) | 612 | WP_072490954.1 | staphylococcal enterotoxin-like toxin X | - |
| ACM6AQ_RS01715 (ACM6AQ_01715) | - | 368910..369209 (+) | 300 | Protein_340 | YxeA family protein | - |
| ACM6AQ_RS01720 (ACM6AQ_01720) | - | 369390..369962 (+) | 573 | WP_000769722.1 | PepSY domain-containing protein | - |
| ACM6AQ_RS01725 (ACM6AQ_01725) | - | 370100..370363 (-) | 264 | WP_001055897.1 | helix-turn-helix domain-containing protein | - |
| ACM6AQ_RS01730 (ACM6AQ_01730) | - | 370657..370911 (+) | 255 | WP_000466742.1 | GlsB/YeaQ/YmgE family stress response membrane protein | - |
| ACM6AQ_RS01735 (ACM6AQ_01735) | - | 370950..371159 (-) | 210 | WP_014532735.1 | hypothetical protein | - |
| ACM6AQ_RS01740 (ACM6AQ_01740) | - | 371337..371918 (+) | 582 | WP_000158376.1 | histidine phosphatase family protein | - |
| ACM6AQ_RS01745 (ACM6AQ_01745) | - | 371984..372367 (-) | 384 | WP_072490953.1 | hypothetical protein | - |
| ACM6AQ_RS01750 (ACM6AQ_01750) | - | 372636..373262 (-) | 627 | WP_000746694.1 | NDxxF motif lipoprotein | - |
| ACM6AQ_RS01755 (ACM6AQ_01755) | - | 373334..373570 (-) | 237 | Protein_348 | hypothetical protein | - |
| ACM6AQ_RS01760 (ACM6AQ_01760) | ahpF | 373706..375229 (-) | 1524 | WP_072490951.1 | alkyl hydroperoxide reductase subunit F | - |
| ACM6AQ_RS01765 (ACM6AQ_01765) | ahpC | 375245..375814 (-) | 570 | WP_000052781.1 | alkyl hydroperoxide reductase subunit C | - |
| ACM6AQ_RS01770 (ACM6AQ_01770) | nfsA | 376306..377061 (+) | 756 | WP_001279728.1 | oxygen-insensitive NADPH nitroreductase | - |
| ACM6AQ_RS01775 (ACM6AQ_01775) | - | 377141..378529 (-) | 1389 | WP_072490950.1 | L-cystine transporter | - |
| ACM6AQ_RS01780 (ACM6AQ_01780) | - | 378614..378715 (+) | 102 | WP_072490949.1 | hypothetical protein | - |
| ACM6AQ_RS01785 (ACM6AQ_01785) | - | 379505..380461 (-) | 957 | WP_072490948.1 | hypothetical protein | - |
| ACM6AQ_RS01790 (ACM6AQ_01790) | - | 380579..381241 (-) | 663 | WP_000394698.1 | hypothetical protein | - |
| ACM6AQ_RS01795 (ACM6AQ_01795) | - | 381384..381791 (-) | 408 | WP_000763770.1 | general stress protein | - |
| ACM6AQ_RS01800 (ACM6AQ_01800) | xpt | 382304..382882 (+) | 579 | WP_000421410.1 | xanthine phosphoribosyltransferase | - |
| ACM6AQ_RS01805 (ACM6AQ_01805) | pbuX | 382882..384150 (+) | 1269 | WP_072490947.1 | xanthine permease PbuX | - |
| ACM6AQ_RS01810 (ACM6AQ_01810) | guaB | 384188..385654 (+) | 1467 | WP_072490946.1 | IMP dehydrogenase | - |
| ACM6AQ_RS01815 (ACM6AQ_01815) | guaA | 385679..387220 (+) | 1542 | WP_000424963.1 | glutamine-hydrolyzing GMP synthase | - |
| ACM6AQ_RS01820 (ACM6AQ_01820) | - | 387333..387869 (-) | 537 | WP_072490945.1 | hypothetical protein | - |
| ACM6AQ_RS01825 (ACM6AQ_01825) | - | 388261..388965 (-) | 705 | WP_000041878.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
Sequence
Protein
Download Length: 167 a.a. Molecular weight: 18539.12 Da Isoelectric Point: 4.7305
>NTDB_id=1098847 ACM6AQ_RS01575 WP_000934799.1 350246..350749(+) (ssbA) [Staphylococcus aureus strain AG21-0619]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF
Nucleotide
Download Length: 504 bp
>NTDB_id=1098847 ACM6AQ_RS01575 WP_000934799.1 350246..350749(+) (ssbA) [Staphylococcus aureus strain AG21-0619]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGTGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGTGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
65.341 |
100 |
0.689 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.971 |
100 |
0.563 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
58.491 |
63.473 |
0.371 |
| ssb | Glaesserella parasuis strain SC1401 |
34.463 |
100 |
0.365 |