Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACM6AK_RS10535 | Genome accession | NZ_CP181109 |
| Coordinates | 2110010..2110480 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain AG21-0611 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2081029..2134548 | 2110010..2110480 | within | 0 |
Gene organization within MGE regions
Location: 2081029..2134548
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM6AK_RS10325 (ACM6AK_10325) | scn | 2081029..2081379 (-) | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| ACM6AK_RS10330 (ACM6AK_10330) | - | 2082064..2082513 (+) | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| ACM6AK_RS10335 (ACM6AK_10335) | - | 2082608..2082946 (-) | 339 | Protein_2001 | SH3 domain-containing protein | - |
| ACM6AK_RS10340 (ACM6AK_10340) | sak | 2083593..2084084 (-) | 492 | WP_000919350.1 | staphylokinase | - |
| ACM6AK_RS10345 (ACM6AK_10345) | - | 2084275..2085030 (-) | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| ACM6AK_RS10350 (ACM6AK_10350) | - | 2085042..2085296 (-) | 255 | WP_000611512.1 | phage holin | - |
| ACM6AK_RS10355 (ACM6AK_10355) | - | 2085348..2085455 (+) | 108 | WP_001791821.1 | hypothetical protein | - |
| ACM6AK_RS10360 (ACM6AK_10360) | pepG1 | 2085508..2085642 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| ACM6AK_RS10365 (ACM6AK_10365) | - | 2085834..2086130 (-) | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| ACM6AK_RS10370 (ACM6AK_10370) | - | 2086188..2086475 (-) | 288 | WP_001040261.1 | hypothetical protein | - |
| ACM6AK_RS10375 (ACM6AK_10375) | - | 2086522..2086674 (-) | 153 | WP_001153681.1 | hypothetical protein | - |
| ACM6AK_RS10380 (ACM6AK_10380) | - | 2086664..2090449 (-) | 3786 | WP_000582154.1 | phage tail spike protein | - |
| ACM6AK_RS10385 (ACM6AK_10385) | - | 2090465..2091949 (-) | 1485 | WP_000567396.1 | phage distal tail protein | - |
| ACM6AK_RS10390 (ACM6AK_10390) | - | 2091946..2096478 (-) | 4533 | WP_001557459.1 | phage tail tape measure protein | - |
| ACM6AK_RS10395 (ACM6AK_10395) | gpGT | 2096535..2096672 (-) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| ACM6AK_RS10400 (ACM6AK_10400) | gpG | 2096723..2097073 (-) | 351 | WP_001096355.1 | phage tail assembly chaperone G | - |
| ACM6AK_RS10405 (ACM6AK_10405) | - | 2097123..2097353 (-) | 231 | Protein_2015 | Ig-like domain-containing protein | - |
| ACM6AK_RS10410 (ACM6AK_10410) | - | 2097389..2098033 (-) | 645 | WP_000985142.1 | major tail protein | - |
| ACM6AK_RS10415 (ACM6AK_10415) | - | 2098034..2098441 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| ACM6AK_RS10420 (ACM6AK_10420) | - | 2098438..2098842 (-) | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| ACM6AK_RS10425 (ACM6AK_10425) | - | 2098839..2099201 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| ACM6AK_RS10430 (ACM6AK_10430) | - | 2099185..2099469 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| ACM6AK_RS10435 (ACM6AK_10435) | - | 2099459..2099743 (-) | 285 | WP_000238241.1 | hypothetical protein | - |
| ACM6AK_RS10440 (ACM6AK_10440) | - | 2099763..2100908 (-) | 1146 | WP_000154568.1 | phage major capsid protein | - |
| ACM6AK_RS10445 (ACM6AK_10445) | - | 2100931..2101668 (-) | 738 | WP_000861911.1 | head maturation protease, ClpP-related | - |
| ACM6AK_RS10450 (ACM6AK_10450) | - | 2101652..2102815 (-) | 1164 | WP_000025268.1 | phage portal protein | - |
| ACM6AK_RS10455 (ACM6AK_10455) | - | 2102831..2104492 (-) | 1662 | WP_000625096.1 | terminase large subunit | - |
| ACM6AK_RS10460 (ACM6AK_10460) | - | 2104489..2104833 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| ACM6AK_RS10465 (ACM6AK_10465) | - | 2104964..2105263 (-) | 300 | WP_000988332.1 | HNH endonuclease | - |
| ACM6AK_RS10470 (ACM6AK_10470) | - | 2105495..2105911 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| ACM6AK_RS10475 (ACM6AK_10475) | - | 2105939..2106139 (-) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| ACM6AK_RS10480 (ACM6AK_10480) | rinB | 2106139..2106288 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ACM6AK_RS10485 (ACM6AK_10485) | - | 2106285..2106491 (-) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| ACM6AK_RS10490 (ACM6AK_10490) | - | 2106488..2106733 (-) | 246 | WP_001282074.1 | hypothetical protein | - |
| ACM6AK_RS10495 (ACM6AK_10495) | - | 2106770..2107306 (-) | 537 | WP_000185693.1 | dUTPase | - |
| ACM6AK_RS10500 (ACM6AK_10500) | - | 2107303..2107548 (-) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| ACM6AK_RS10505 (ACM6AK_10505) | - | 2107563..2107805 (-) | 243 | WP_000221877.1 | SAV1978 family virulence-associated passenger protein | - |
| ACM6AK_RS10510 (ACM6AK_10510) | - | 2107808..2108065 (-) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| ACM6AK_RS10515 (ACM6AK_10515) | - | 2108065..2108436 (-) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACM6AK_RS10520 (ACM6AK_10520) | - | 2108449..2108853 (-) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACM6AK_RS10525 (ACM6AK_10525) | - | 2108862..2109080 (-) | 219 | WP_000338528.1 | hypothetical protein | - |
| ACM6AK_RS10530 (ACM6AK_10530) | - | 2109087..2109980 (-) | 894 | WP_000148333.1 | DnaD domain protein | - |
| ACM6AK_RS10535 (ACM6AK_10535) | ssbA | 2110010..2110480 (-) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| ACM6AK_RS10540 (ACM6AK_10540) | - | 2110481..2111098 (-) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| ACM6AK_RS10545 (ACM6AK_10545) | - | 2111179..2112099 (-) | 921 | WP_000180600.1 | recombinase RecT | - |
| ACM6AK_RS10550 (ACM6AK_10550) | - | 2112101..2114044 (-) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| ACM6AK_RS10555 (ACM6AK_10555) | - | 2114053..2114316 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACM6AK_RS10560 (ACM6AK_10560) | - | 2114325..2114585 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| ACM6AK_RS10565 (ACM6AK_10565) | - | 2114590..2114892 (-) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| ACM6AK_RS10570 (ACM6AK_10570) | - | 2114987..2115148 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| ACM6AK_RS10575 (ACM6AK_10575) | - | 2115145..2115468 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| ACM6AK_RS10580 (ACM6AK_10580) | - | 2115523..2115903 (+) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| ACM6AK_RS10585 (ACM6AK_10585) | - | 2115890..2116087 (-) | 198 | WP_001148862.1 | hypothetical protein | - |
| ACM6AK_RS10590 (ACM6AK_10590) | - | 2116103..2116852 (-) | 750 | WP_416152572.1 | phage antirepressor KilAC domain-containing protein | - |
| ACM6AK_RS10595 (ACM6AK_10595) | - | 2116909..2117118 (+) | 210 | WP_000772137.1 | hypothetical protein | - |
| ACM6AK_RS10600 (ACM6AK_10600) | - | 2117111..2117251 (-) | 141 | WP_000939495.1 | hypothetical protein | - |
| ACM6AK_RS10605 (ACM6AK_10605) | - | 2117266..2117709 (-) | 444 | WP_000435360.1 | hypothetical protein | - |
| ACM6AK_RS10610 (ACM6AK_10610) | - | 2117722..2117964 (-) | 243 | WP_000639923.1 | DUF739 family protein | - |
| ACM6AK_RS10615 (ACM6AK_10615) | - | 2118128..2118844 (+) | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| ACM6AK_RS10620 (ACM6AK_10620) | - | 2118856..2119710 (+) | 855 | WP_001557601.1 | HIRAN domain-containing protein | - |
| ACM6AK_RS10625 (ACM6AK_10625) | - | 2119784..2119930 (+) | 147 | WP_000345949.1 | hypothetical protein | - |
| ACM6AK_RS10630 (ACM6AK_10630) | - | 2119927..2120112 (+) | 186 | WP_000109189.1 | hypothetical protein | - |
| ACM6AK_RS10635 (ACM6AK_10635) | - | 2120183..2120365 (+) | 183 | WP_000705245.1 | hypothetical protein | - |
| ACM6AK_RS10640 (ACM6AK_10640) | - | 2120444..2121157 (+) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| ACM6AK_RS10645 (ACM6AK_10645) | - | 2121348..2122385 (+) | 1038 | WP_000857200.1 | tyrosine-type recombinase/integrase | - |
| ACM6AK_RS10650 (ACM6AK_10650) | sph | 2122442..2123266 (+) | 825 | Protein_2064 | sphingomyelin phosphodiesterase | - |
| ACM6AK_RS10655 (ACM6AK_10655) | lukG | 2123504..2124520 (-) | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| ACM6AK_RS10660 (ACM6AK_10660) | lukH | 2124542..2125597 (-) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| ACM6AK_RS10665 (ACM6AK_10665) | - | 2126033..2127256 (+) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| ACM6AK_RS10670 (ACM6AK_10670) | - | 2127700..2129007 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| ACM6AK_RS10675 (ACM6AK_10675) | groL | 2129547..2131163 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| ACM6AK_RS10680 (ACM6AK_10680) | groES | 2131239..2131523 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| ACM6AK_RS10685 (ACM6AK_10685) | mroQ | 2131698..2132441 (+) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| ACM6AK_RS10690 (ACM6AK_10690) | - | 2132466..2133725 (-) | 1260 | WP_000120297.1 | SdrH family protein | - |
| ACM6AK_RS10695 (ACM6AK_10695) | - | 2133922..2134548 (+) | 627 | WP_000522381.1 | nitroreductase family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1098408 ACM6AK_RS10535 WP_000934759.1 2110010..2110480(-) (ssbA) [Staphylococcus aureus strain AG21-0611]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1098408 ACM6AK_RS10535 WP_000934759.1 2110010..2110480(-) (ssbA) [Staphylococcus aureus strain AG21-0611]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |