Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACM6AM_RS10695 | Genome accession | NZ_CP181104 |
| Coordinates | 2129186..2129656 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain AG21-0613 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2100205..2153724 | 2129186..2129656 | within | 0 |
Gene organization within MGE regions
Location: 2100205..2153724
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM6AM_RS10485 (ACM6AM_10490) | scn | 2100205..2100555 (-) | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| ACM6AM_RS10490 (ACM6AM_10495) | - | 2101240..2101689 (+) | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| ACM6AM_RS10495 (ACM6AM_10500) | - | 2101784..2102122 (-) | 339 | Protein_2033 | SH3 domain-containing protein | - |
| ACM6AM_RS10500 (ACM6AM_10505) | sak | 2102769..2103260 (-) | 492 | WP_000919350.1 | staphylokinase | - |
| ACM6AM_RS10505 (ACM6AM_10510) | - | 2103451..2104206 (-) | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| ACM6AM_RS10510 (ACM6AM_10515) | - | 2104218..2104472 (-) | 255 | WP_000611512.1 | phage holin | - |
| ACM6AM_RS10515 (ACM6AM_10520) | - | 2104524..2104631 (+) | 108 | WP_001791821.1 | hypothetical protein | - |
| ACM6AM_RS10520 (ACM6AM_10525) | pepG1 | 2104684..2104818 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| ACM6AM_RS10525 (ACM6AM_10530) | - | 2105010..2105306 (-) | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| ACM6AM_RS10530 (ACM6AM_10535) | - | 2105364..2105651 (-) | 288 | WP_001040261.1 | hypothetical protein | - |
| ACM6AM_RS10535 (ACM6AM_10540) | - | 2105698..2105850 (-) | 153 | WP_001153681.1 | hypothetical protein | - |
| ACM6AM_RS10540 (ACM6AM_10545) | - | 2105840..2109625 (-) | 3786 | WP_000582154.1 | phage tail spike protein | - |
| ACM6AM_RS10545 (ACM6AM_10550) | - | 2109641..2111125 (-) | 1485 | WP_000567396.1 | phage distal tail protein | - |
| ACM6AM_RS10550 (ACM6AM_10555) | - | 2111122..2115654 (-) | 4533 | WP_001557459.1 | phage tail tape measure protein | - |
| ACM6AM_RS10555 (ACM6AM_10560) | gpGT | 2115711..2115848 (-) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| ACM6AM_RS10560 (ACM6AM_10565) | gpG | 2115899..2116249 (-) | 351 | WP_001096355.1 | phage tail assembly chaperone G | - |
| ACM6AM_RS10565 (ACM6AM_10570) | - | 2116299..2116529 (-) | 231 | Protein_2047 | Ig-like domain-containing protein | - |
| ACM6AM_RS10570 (ACM6AM_10575) | - | 2116565..2117209 (-) | 645 | WP_000985142.1 | major tail protein | - |
| ACM6AM_RS10575 (ACM6AM_10580) | - | 2117210..2117617 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| ACM6AM_RS10580 (ACM6AM_10585) | - | 2117614..2118018 (-) | 405 | WP_000114341.1 | HK97 gp10 family phage protein | - |
| ACM6AM_RS10585 (ACM6AM_10590) | - | 2118015..2118377 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| ACM6AM_RS10590 (ACM6AM_10595) | - | 2118361..2118645 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| ACM6AM_RS10595 (ACM6AM_10600) | - | 2118635..2118919 (-) | 285 | WP_000238241.1 | hypothetical protein | - |
| ACM6AM_RS10600 (ACM6AM_10605) | - | 2118939..2120084 (-) | 1146 | WP_000154565.1 | phage major capsid protein | - |
| ACM6AM_RS10605 (ACM6AM_10610) | - | 2120107..2120844 (-) | 738 | WP_000861911.1 | head maturation protease, ClpP-related | - |
| ACM6AM_RS10610 (ACM6AM_10615) | - | 2120828..2121991 (-) | 1164 | WP_000025268.1 | phage portal protein | - |
| ACM6AM_RS10615 (ACM6AM_10620) | - | 2122007..2123668 (-) | 1662 | WP_000625096.1 | terminase large subunit | - |
| ACM6AM_RS10620 (ACM6AM_10625) | - | 2123665..2124009 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| ACM6AM_RS10625 (ACM6AM_10630) | - | 2124140..2124439 (-) | 300 | WP_000988332.1 | HNH endonuclease | - |
| ACM6AM_RS10630 (ACM6AM_10635) | - | 2124671..2125087 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| ACM6AM_RS10635 (ACM6AM_10640) | - | 2125115..2125315 (-) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| ACM6AM_RS10640 (ACM6AM_10645) | rinB | 2125315..2125464 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ACM6AM_RS10645 (ACM6AM_10650) | - | 2125461..2125667 (-) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| ACM6AM_RS10650 (ACM6AM_10655) | - | 2125664..2125909 (-) | 246 | WP_001282077.1 | hypothetical protein | - |
| ACM6AM_RS10655 (ACM6AM_10660) | - | 2125946..2126482 (-) | 537 | WP_000185693.1 | dUTPase | - |
| ACM6AM_RS10660 (ACM6AM_10665) | - | 2126479..2126724 (-) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| ACM6AM_RS10665 (ACM6AM_10670) | - | 2126739..2126981 (-) | 243 | WP_000221877.1 | SAV1978 family virulence-associated passenger protein | - |
| ACM6AM_RS10670 (ACM6AM_10675) | - | 2126984..2127241 (-) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| ACM6AM_RS10675 (ACM6AM_10680) | - | 2127241..2127612 (-) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACM6AM_RS10680 (ACM6AM_10685) | - | 2127625..2128029 (-) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACM6AM_RS10685 (ACM6AM_10690) | - | 2128038..2128256 (-) | 219 | WP_000338528.1 | hypothetical protein | - |
| ACM6AM_RS10690 (ACM6AM_10695) | - | 2128263..2129156 (-) | 894 | WP_000148333.1 | DnaD domain protein | - |
| ACM6AM_RS10695 (ACM6AM_10700) | ssbA | 2129186..2129656 (-) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| ACM6AM_RS10700 (ACM6AM_10705) | - | 2129657..2130274 (-) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| ACM6AM_RS10705 (ACM6AM_10710) | - | 2130355..2131275 (-) | 921 | WP_000180600.1 | recombinase RecT | - |
| ACM6AM_RS10710 (ACM6AM_10715) | - | 2131277..2133220 (-) | 1944 | WP_086039531.1 | AAA family ATPase | - |
| ACM6AM_RS10715 (ACM6AM_10720) | - | 2133229..2133492 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACM6AM_RS10720 (ACM6AM_10725) | - | 2133501..2133761 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| ACM6AM_RS10725 (ACM6AM_10730) | - | 2133766..2134068 (-) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| ACM6AM_RS10730 (ACM6AM_10735) | - | 2134163..2134324 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| ACM6AM_RS10735 (ACM6AM_10740) | - | 2134321..2134644 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| ACM6AM_RS10740 (ACM6AM_10745) | - | 2134699..2135079 (+) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| ACM6AM_RS10745 (ACM6AM_10750) | - | 2135066..2135263 (-) | 198 | WP_001148862.1 | hypothetical protein | - |
| ACM6AM_RS10750 (ACM6AM_10755) | - | 2135279..2136028 (-) | 750 | WP_001148338.1 | phage antirepressor KilAC domain-containing protein | - |
| ACM6AM_RS10755 (ACM6AM_10760) | - | 2136085..2136294 (+) | 210 | WP_000772137.1 | hypothetical protein | - |
| ACM6AM_RS10760 (ACM6AM_10765) | - | 2136287..2136427 (-) | 141 | WP_000939495.1 | hypothetical protein | - |
| ACM6AM_RS10765 (ACM6AM_10770) | - | 2136442..2136885 (-) | 444 | WP_000435360.1 | hypothetical protein | - |
| ACM6AM_RS10770 (ACM6AM_10775) | - | 2136898..2137140 (-) | 243 | WP_000639923.1 | DUF739 family protein | - |
| ACM6AM_RS10775 (ACM6AM_10780) | - | 2137304..2138020 (+) | 717 | WP_001083975.1 | LexA family transcriptional regulator | - |
| ACM6AM_RS10780 (ACM6AM_10785) | - | 2138032..2138886 (+) | 855 | WP_001557601.1 | HIRAN domain-containing protein | - |
| ACM6AM_RS10785 (ACM6AM_10790) | - | 2138960..2139106 (+) | 147 | WP_000345949.1 | hypothetical protein | - |
| ACM6AM_RS10790 (ACM6AM_10795) | - | 2139103..2139288 (+) | 186 | WP_000109189.1 | hypothetical protein | - |
| ACM6AM_RS10795 (ACM6AM_10800) | - | 2139359..2139541 (+) | 183 | WP_000705245.1 | hypothetical protein | - |
| ACM6AM_RS10800 (ACM6AM_10805) | - | 2139620..2140333 (+) | 714 | WP_001549185.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| ACM6AM_RS10805 (ACM6AM_10810) | - | 2140524..2141561 (+) | 1038 | WP_000857200.1 | tyrosine-type recombinase/integrase | - |
| ACM6AM_RS10810 (ACM6AM_10815) | sph | 2141618..2142442 (+) | 825 | Protein_2096 | sphingomyelin phosphodiesterase | - |
| ACM6AM_RS10815 (ACM6AM_10820) | lukG | 2142680..2143696 (-) | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| ACM6AM_RS10820 (ACM6AM_10825) | lukH | 2143718..2144773 (-) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| ACM6AM_RS10825 (ACM6AM_10830) | - | 2145209..2146432 (+) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| ACM6AM_RS10830 (ACM6AM_10835) | - | 2146876..2148183 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| ACM6AM_RS10835 (ACM6AM_10840) | groL | 2148723..2150339 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| ACM6AM_RS10840 (ACM6AM_10845) | groES | 2150415..2150699 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
| ACM6AM_RS10845 (ACM6AM_10850) | mroQ | 2150874..2151617 (+) | 744 | WP_000197635.1 | CPBP family intramembrane glutamic endopeptidase MroQ | - |
| ACM6AM_RS10850 (ACM6AM_10855) | - | 2151642..2152901 (-) | 1260 | WP_001558038.1 | SdrH family protein | - |
| ACM6AM_RS10855 (ACM6AM_10860) | - | 2153098..2153724 (+) | 627 | WP_000522381.1 | nitroreductase family protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1098324 ACM6AM_RS10695 WP_000934759.1 2129186..2129656(-) (ssbA) [Staphylococcus aureus strain AG21-0613]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1098324 ACM6AM_RS10695 WP_000934759.1 2129186..2129656(-) (ssbA) [Staphylococcus aureus strain AG21-0613]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |