Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACM6AN_RS11030 | Genome accession | NZ_CP181102 |
| Coordinates | 2175982..2176452 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain AG21-0614 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2145665..2197792 | 2175982..2176452 | within | 0 |
Gene organization within MGE regions
Location: 2145665..2197792
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM6AN_RS10815 (ACM6AN_10815) | scn | 2145665..2146015 (-) | 351 | WP_000702262.1 | complement inhibitor SCIN-A | - |
| ACM6AN_RS10820 (ACM6AN_10820) | - | 2146698..2147147 (+) | 450 | WP_000727645.1 | chemotaxis-inhibiting protein CHIPS | - |
| ACM6AN_RS10825 (ACM6AN_10825) | - | 2147242..2147579 (-) | 338 | Protein_2097 | SH3 domain-containing protein | - |
| ACM6AN_RS10830 (ACM6AN_10830) | sak | 2148223..2148714 (-) | 492 | WP_000920042.1 | staphylokinase | - |
| ACM6AN_RS10835 (ACM6AN_10835) | - | 2148905..2149660 (-) | 756 | WP_000861026.1 | CHAP domain-containing protein | - |
| ACM6AN_RS10840 (ACM6AN_10840) | - | 2149672..2149926 (-) | 255 | WP_000611512.1 | phage holin | - |
| ACM6AN_RS10845 (ACM6AN_10845) | - | 2149978..2150085 (+) | 108 | WP_031762631.1 | hypothetical protein | - |
| ACM6AN_RS10850 (ACM6AN_10850) | pepG1 | 2150138..2150272 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| ACM6AN_RS10855 (ACM6AN_10855) | sep | 2150517..2151299 (-) | 783 | WP_000034846.1 | staphylococcal enterotoxin type P | - |
| ACM6AN_RS10860 (ACM6AN_10860) | - | 2151711..2152085 (-) | 375 | WP_000340977.1 | hypothetical protein | - |
| ACM6AN_RS10865 (ACM6AN_10865) | - | 2152141..2152428 (-) | 288 | WP_001262621.1 | hypothetical protein | - |
| ACM6AN_RS10870 (ACM6AN_10870) | - | 2152474..2152626 (-) | 153 | WP_001000058.1 | hypothetical protein | - |
| ACM6AN_RS10875 (ACM6AN_10875) | - | 2152619..2156401 (-) | 3783 | WP_000582152.1 | phage tail spike protein | - |
| ACM6AN_RS10880 (ACM6AN_10880) | - | 2156417..2157901 (-) | 1485 | WP_000567396.1 | phage distal tail protein | - |
| ACM6AN_RS10885 (ACM6AN_10885) | - | 2157898..2162427 (-) | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| ACM6AN_RS10890 (ACM6AN_10890) | gpGT | 2162484..2162621 (-) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| ACM6AN_RS10895 (ACM6AN_10895) | gpG | 2162672..2163022 (-) | 351 | WP_001096355.1 | phage tail assembly chaperone G | - |
| ACM6AN_RS10900 (ACM6AN_10900) | - | 2163072..2163302 (-) | 231 | Protein_2112 | Ig-like domain-containing protein | - |
| ACM6AN_RS10905 (ACM6AN_10905) | - | 2163338..2163982 (-) | 645 | WP_000268740.1 | major tail protein | - |
| ACM6AN_RS10910 (ACM6AN_10910) | - | 2163983..2164390 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| ACM6AN_RS10915 (ACM6AN_10915) | - | 2164387..2164791 (-) | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| ACM6AN_RS10920 (ACM6AN_10920) | - | 2164788..2165150 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| ACM6AN_RS10925 (ACM6AN_10925) | - | 2165134..2165418 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| ACM6AN_RS10930 (ACM6AN_10930) | - | 2165408..2165691 (-) | 284 | Protein_2118 | hypothetical protein | - |
| ACM6AN_RS10935 (ACM6AN_10935) | - | 2165711..2166856 (-) | 1146 | WP_000154559.1 | phage major capsid protein | - |
| ACM6AN_RS10940 (ACM6AN_10940) | - | 2166880..2167617 (-) | 738 | WP_000642728.1 | head maturation protease, ClpP-related | - |
| ACM6AN_RS10945 (ACM6AN_10945) | - | 2167601..2168788 (-) | 1188 | WP_000025274.1 | phage portal protein | - |
| ACM6AN_RS10950 (ACM6AN_10950) | - | 2168804..2170465 (-) | 1662 | WP_000625088.1 | terminase large subunit | - |
| ACM6AN_RS10955 (ACM6AN_10955) | - | 2170462..2170806 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| ACM6AN_RS10960 (ACM6AN_10960) | - | 2170936..2171235 (-) | 300 | WP_000988332.1 | HNH endonuclease | - |
| ACM6AN_RS10965 (ACM6AN_10965) | - | 2171467..2171883 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| ACM6AN_RS10970 (ACM6AN_10970) | - | 2171911..2172111 (-) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| ACM6AN_RS10975 (ACM6AN_10975) | rinB | 2172111..2172260 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ACM6AN_RS10980 (ACM6AN_10980) | - | 2172257..2172463 (-) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| ACM6AN_RS10985 (ACM6AN_10985) | - | 2172460..2172705 (-) | 246 | WP_001282077.1 | hypothetical protein | - |
| ACM6AN_RS10990 (ACM6AN_10990) | - | 2172742..2173278 (-) | 537 | WP_000185693.1 | dUTPase | - |
| ACM6AN_RS10995 (ACM6AN_10995) | - | 2173275..2173520 (-) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| ACM6AN_RS11000 (ACM6AN_11000) | - | 2173535..2173777 (-) | 243 | WP_001811924.1 | SAV1978 family virulence-associated passenger protein | - |
| ACM6AN_RS11005 (ACM6AN_11005) | - | 2173780..2174037 (-) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| ACM6AN_RS11010 (ACM6AN_11010) | - | 2174037..2174408 (-) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACM6AN_RS11015 (ACM6AN_11015) | - | 2174421..2174825 (-) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACM6AN_RS11020 (ACM6AN_11020) | - | 2174834..2175052 (-) | 219 | WP_000338528.1 | hypothetical protein | - |
| ACM6AN_RS11025 (ACM6AN_11025) | - | 2175059..2175952 (-) | 894 | WP_000148333.1 | DnaD domain protein | - |
| ACM6AN_RS11030 (ACM6AN_11030) | ssbA | 2175982..2176452 (-) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| ACM6AN_RS11035 (ACM6AN_11035) | - | 2176453..2177070 (-) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| ACM6AN_RS11040 (ACM6AN_11040) | - | 2177151..2178071 (-) | 921 | WP_000180600.1 | recombinase RecT | - |
| ACM6AN_RS11045 (ACM6AN_11045) | - | 2178073..2180016 (-) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| ACM6AN_RS11050 (ACM6AN_11050) | - | 2180025..2180288 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACM6AN_RS11055 (ACM6AN_11055) | - | 2180297..2180557 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| ACM6AN_RS11060 (ACM6AN_11060) | - | 2180562..2180864 (-) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| ACM6AN_RS11065 (ACM6AN_11065) | - | 2180959..2181120 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| ACM6AN_RS11070 (ACM6AN_11070) | - | 2181117..2181440 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| ACM6AN_RS11075 (ACM6AN_11075) | - | 2181495..2181875 (+) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| ACM6AN_RS11080 (ACM6AN_11080) | - | 2181862..2182059 (-) | 198 | WP_001148856.1 | hypothetical protein | - |
| ACM6AN_RS11085 (ACM6AN_11085) | - | 2182075..2182827 (-) | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| ACM6AN_RS11090 (ACM6AN_11090) | - | 2182878..2183207 (+) | 330 | WP_000128909.1 | hypothetical protein | - |
| ACM6AN_RS11095 (ACM6AN_11095) | - | 2183196..2183411 (-) | 216 | WP_001025404.1 | Thoeris anti-defense Tad2 family protein | - |
| ACM6AN_RS11100 (ACM6AN_11100) | - | 2183427..2183690 (-) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| ACM6AN_RS11105 (ACM6AN_11105) | - | 2183687..2183861 (-) | 175 | Protein_2153 | transcriptional regulator | - |
| ACM6AN_RS11110 (ACM6AN_11110) | - | 2183824..2184537 (+) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| ACM6AN_RS11115 (ACM6AN_11115) | - | 2184553..2185485 (+) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| ACM6AN_RS11120 (ACM6AN_11120) | - | 2185491..2185832 (+) | 342 | WP_000591749.1 | hypothetical protein | - |
| ACM6AN_RS11125 (ACM6AN_11125) | - | 2186036..2186218 (+) | 183 | WP_000694772.1 | hypothetical protein | - |
| ACM6AN_RS11130 (ACM6AN_11130) | - | 2186318..2187301 (+) | 984 | WP_001558608.1 | glycosyltransferase family 2 protein | - |
| ACM6AN_RS11135 (ACM6AN_11135) | - | 2187312..2187554 (+) | 243 | WP_000427213.1 | hypothetical protein | - |
| ACM6AN_RS11140 (ACM6AN_11140) | - | 2187617..2188654 (+) | 1038 | WP_000857180.1 | tyrosine-type recombinase/integrase | - |
| ACM6AN_RS11145 (ACM6AN_11145) | sph | 2188711..2189535 (+) | 825 | Protein_2161 | sphingomyelin phosphodiesterase | - |
| ACM6AN_RS11150 (ACM6AN_11150) | lukG | 2189773..2190789 (-) | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| ACM6AN_RS11155 (ACM6AN_11155) | lukH | 2190811..2191866 (-) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| ACM6AN_RS11160 (ACM6AN_11160) | - | 2192302..2193525 (+) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| ACM6AN_RS11165 (ACM6AN_11165) | - | 2193969..2195276 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| ACM6AN_RS11170 (ACM6AN_11170) | groL | 2195816..2197432 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| ACM6AN_RS11175 (ACM6AN_11175) | groES | 2197508..2197792 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1098281 ACM6AN_RS11030 WP_000934759.1 2175982..2176452(-) (ssbA) [Staphylococcus aureus strain AG21-0614]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1098281 ACM6AN_RS11030 WP_000934759.1 2175982..2176452(-) (ssbA) [Staphylococcus aureus strain AG21-0614]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |