Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACM6AU_RS09660 | Genome accession | NZ_CP181097 |
| Coordinates | 1964244..1964714 (-) | Length | 156 a.a. |
| NCBI ID | WP_000610648.1 | Uniprot ID | A0A090M1W2 |
| Organism | Staphylococcus aureus strain AG21-0627 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 1934957..1986464 | 1964244..1964714 | within | 0 |
Gene organization within MGE regions
Location: 1934957..1986464
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACM6AU_RS09445 (ACM6AU_09445) | scn | 1934957..1935307 (-) | 351 | WP_000702263.1 | complement inhibitor SCIN-A | - |
| ACM6AU_RS09450 (ACM6AU_09450) | - | 1935991..1936440 (+) | 450 | WP_000727649.1 | chemotaxis-inhibiting protein CHIPS | - |
| ACM6AU_RS09455 (ACM6AU_09455) | - | 1936535..1936873 (-) | 339 | Protein_1826 | SH3 domain-containing protein | - |
| ACM6AU_RS09460 (ACM6AU_09460) | sak | 1937520..1938011 (-) | 492 | WP_000919350.1 | staphylokinase | - |
| ACM6AU_RS09465 (ACM6AU_09465) | - | 1938202..1938957 (-) | 756 | WP_000861038.1 | CHAP domain-containing protein | - |
| ACM6AU_RS09470 (ACM6AU_09470) | - | 1938969..1939223 (-) | 255 | WP_000611509.1 | phage holin | - |
| ACM6AU_RS09475 (ACM6AU_09475) | - | 1939275..1939382 (+) | 108 | WP_001791821.1 | hypothetical protein | - |
| ACM6AU_RS09480 (ACM6AU_09480) | pepG1 | 1939435..1939569 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| ACM6AU_RS09485 (ACM6AU_09485) | - | 1939761..1940057 (-) | 297 | WP_000539688.1 | DUF2951 domain-containing protein | - |
| ACM6AU_RS09490 (ACM6AU_09490) | - | 1940115..1940402 (-) | 288 | WP_001040261.1 | hypothetical protein | - |
| ACM6AU_RS09495 (ACM6AU_09495) | - | 1940449..1940601 (-) | 153 | WP_001153681.1 | hypothetical protein | - |
| ACM6AU_RS09500 (ACM6AU_09500) | - | 1940591..1944376 (-) | 3786 | WP_000582165.1 | phage tail spike protein | - |
| ACM6AU_RS09505 (ACM6AU_09505) | - | 1944392..1945876 (-) | 1485 | WP_000567408.1 | phage distal tail protein | - |
| ACM6AU_RS09510 (ACM6AU_09510) | - | 1945873..1950402 (-) | 4530 | WP_001796452.1 | phage tail tape measure protein | - |
| ACM6AU_RS09515 (ACM6AU_09515) | gpGT | 1950459..1950596 (-) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| ACM6AU_RS09520 (ACM6AU_09520) | gpG | 1950647..1950997 (-) | 351 | WP_001096355.1 | phage tail assembly chaperone G | - |
| ACM6AU_RS09525 (ACM6AU_09525) | - | 1951047..1951271 (-) | 225 | WP_071621395.1 | Ig-like domain-containing protein | - |
| ACM6AU_RS09530 (ACM6AU_09530) | - | 1951313..1951957 (-) | 645 | WP_000268733.1 | major tail protein | - |
| ACM6AU_RS09535 (ACM6AU_09535) | - | 1951958..1952365 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| ACM6AU_RS09540 (ACM6AU_09540) | - | 1952362..1952766 (-) | 405 | WP_000114227.1 | HK97 gp10 family phage protein | - |
| ACM6AU_RS09545 (ACM6AU_09545) | - | 1952763..1953125 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| ACM6AU_RS09550 (ACM6AU_09550) | - | 1953109..1953393 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| ACM6AU_RS09555 (ACM6AU_09555) | - | 1953383..1953666 (-) | 284 | Protein_1846 | hypothetical protein | - |
| ACM6AU_RS09560 (ACM6AU_09560) | - | 1953686..1954831 (-) | 1146 | WP_000154559.1 | phage major capsid protein | - |
| ACM6AU_RS09565 (ACM6AU_09565) | - | 1954855..1955592 (-) | 738 | WP_000642728.1 | head maturation protease, ClpP-related | - |
| ACM6AU_RS09570 (ACM6AU_09570) | - | 1955576..1956763 (-) | 1188 | WP_000025274.1 | phage portal protein | - |
| ACM6AU_RS09575 (ACM6AU_09575) | - | 1956779..1958440 (-) | 1662 | WP_000625088.1 | terminase large subunit | - |
| ACM6AU_RS09580 (ACM6AU_09580) | - | 1958437..1958781 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| ACM6AU_RS09585 (ACM6AU_09585) | - | 1958912..1959211 (-) | 300 | WP_000988336.1 | HNH endonuclease | - |
| ACM6AU_RS09590 (ACM6AU_09590) | - | 1959443..1959859 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| ACM6AU_RS09595 (ACM6AU_09595) | - | 1959887..1960087 (-) | 201 | WP_001622114.1 | DUF1514 family protein | - |
| ACM6AU_RS09600 (ACM6AU_09600) | rinB | 1960087..1960236 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| ACM6AU_RS09605 (ACM6AU_09605) | - | 1960233..1960619 (-) | 387 | WP_000592207.1 | hypothetical protein | - |
| ACM6AU_RS09610 (ACM6AU_09610) | - | 1960616..1960822 (-) | 207 | WP_000195803.1 | DUF1381 domain-containing protein | - |
| ACM6AU_RS09615 (ACM6AU_09615) | - | 1960819..1961064 (-) | 246 | WP_001282074.1 | hypothetical protein | - |
| ACM6AU_RS09620 (ACM6AU_09620) | - | 1961101..1961637 (-) | 537 | WP_001066447.1 | dUTP diphosphatase | - |
| ACM6AU_RS09625 (ACM6AU_09625) | - | 1961630..1961800 (-) | 171 | WP_000714403.1 | hypothetical protein | - |
| ACM6AU_RS09630 (ACM6AU_09630) | - | 1961787..1962041 (-) | 255 | WP_001065097.1 | DUF1024 family protein | - |
| ACM6AU_RS09635 (ACM6AU_09635) | - | 1962056..1962298 (-) | 243 | WP_000131370.1 | SAV1978 family virulence-associated passenger protein | - |
| ACM6AU_RS09640 (ACM6AU_09640) | - | 1962302..1962670 (-) | 369 | WP_000101288.1 | SA1788 family PVL leukocidin-associated protein | - |
| ACM6AU_RS09645 (ACM6AU_09645) | - | 1962683..1963087 (-) | 405 | WP_000401960.1 | RusA family crossover junction endodeoxyribonuclease | - |
| ACM6AU_RS09650 (ACM6AU_09650) | - | 1963096..1963314 (-) | 219 | WP_000338530.1 | hypothetical protein | - |
| ACM6AU_RS09655 (ACM6AU_09655) | - | 1963321..1964214 (-) | 894 | WP_000148321.1 | DnaD domain protein | - |
| ACM6AU_RS09660 (ACM6AU_09660) | ssbA | 1964244..1964714 (-) | 471 | WP_000610648.1 | single-stranded DNA-binding protein | Machinery gene |
| ACM6AU_RS09665 (ACM6AU_09665) | - | 1964715..1965332 (-) | 618 | WP_073394849.1 | MBL fold metallo-hydrolase | - |
| ACM6AU_RS09670 (ACM6AU_09670) | - | 1965412..1966332 (-) | 921 | WP_000138475.1 | recombinase RecT | - |
| ACM6AU_RS09675 (ACM6AU_09675) | - | 1966334..1968277 (-) | 1944 | WP_416152624.1 | AAA family ATPase | - |
| ACM6AU_RS09680 (ACM6AU_09680) | - | 1968286..1968549 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| ACM6AU_RS09685 (ACM6AU_09685) | - | 1968558..1968818 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| ACM6AU_RS09690 (ACM6AU_09690) | - | 1968823..1969125 (-) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| ACM6AU_RS09695 (ACM6AU_09695) | - | 1969220..1969381 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| ACM6AU_RS09700 (ACM6AU_09700) | - | 1969378..1969701 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| ACM6AU_RS09705 (ACM6AU_09705) | - | 1969756..1970136 (+) | 381 | WP_000762519.1 | DUF2513 domain-containing protein | - |
| ACM6AU_RS09710 (ACM6AU_09710) | - | 1970123..1970320 (-) | 198 | WP_001148862.1 | hypothetical protein | - |
| ACM6AU_RS09715 (ACM6AU_09715) | - | 1970336..1971088 (-) | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| ACM6AU_RS09720 (ACM6AU_09720) | - | 1971139..1971468 (+) | 330 | WP_000128907.1 | hypothetical protein | - |
| ACM6AU_RS09725 (ACM6AU_09725) | - | 1971457..1971672 (-) | 216 | WP_001025404.1 | Thoeris anti-defense Tad2 family protein | - |
| ACM6AU_RS09730 (ACM6AU_09730) | - | 1971688..1971951 (-) | 264 | WP_000854073.1 | helix-turn-helix transcriptional regulator | - |
| ACM6AU_RS09735 (ACM6AU_09735) | - | 1971948..1972121 (-) | 174 | WP_001801500.1 | hypothetical protein | - |
| ACM6AU_RS09740 (ACM6AU_09740) | - | 1972084..1972797 (+) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| ACM6AU_RS09745 (ACM6AU_09745) | - | 1972813..1973745 (+) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| ACM6AU_RS09750 (ACM6AU_09750) | - | 1973751..1974092 (+) | 342 | WP_000591749.1 | hypothetical protein | - |
| ACM6AU_RS09755 (ACM6AU_09755) | - | 1974296..1974478 (+) | 183 | WP_000705248.1 | hypothetical protein | - |
| ACM6AU_RS09760 (ACM6AU_09760) | - | 1974578..1975042 (+) | 465 | WP_000825947.1 | hypothetical protein | - |
| ACM6AU_RS09765 (ACM6AU_09765) | - | 1975101..1975976 (+) | 876 | Protein_1888 | tyrosine-type recombinase/integrase | - |
| ACM6AU_RS09775 (ACM6AU_09775) | - | 1977198..1977365 (+) | 168 | Protein_1890 | site-specific integrase | - |
| ACM6AU_RS09780 (ACM6AU_09780) | sph | 1977422..1978246 (+) | 825 | Protein_1891 | sphingomyelin phosphodiesterase | - |
| ACM6AU_RS09785 (ACM6AU_09785) | - | 1978503..1979522 (-) | 1020 | WP_000595616.1 | leukocidin/hemolysin toxin family protein | - |
| ACM6AU_RS09790 (ACM6AU_09790) | - | 1979544..1980599 (-) | 1056 | WP_000791399.1 | leukocidin family pore-forming toxin | - |
| ACM6AU_RS09795 (ACM6AU_09795) | - | 1981030..1982253 (+) | 1224 | WP_064132826.1 | ArgE/DapE family deacylase | - |
| ACM6AU_RS09800 (ACM6AU_09800) | - | 1982649..1983956 (+) | 1308 | WP_001045070.1 | TrkH family potassium uptake protein | - |
| ACM6AU_RS09805 (ACM6AU_09805) | groL | 1984488..1986104 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| ACM6AU_RS09810 (ACM6AU_09810) | groES | 1986180..1986464 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=1098192 ACM6AU_RS09660 WP_000610648.1 1964244..1964714(-) (ssbA) [Staphylococcus aureus strain AG21-0627]
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
MINRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIELNDDDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=1098192 ACM6AU_RS09660 WP_000610648.1 1964244..1964714(-) (ssbA) [Staphylococcus aureus strain AG21-0627]
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
ATGATAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGGACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGTACATTTACAAATGCACAAGGCGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAACTAAATGATGATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.367 |
100 |
0.628 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
51.176 |
100 |
0.558 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.768 |
100 |
0.372 |