Detailed information NTG1097993

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: RBI96_RS19680
• Genome accession: NZ_CP181075
• Coordinates: 4211855..4212919 (-)
• Length: 354 a.a.
• NCBI ID: WP_003110888.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain LACPHL-BACT-2023-00013
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4206855..4217919

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
RBI96_RS19655 (RBI96_019655)	aroK	4207390..4207908 (-)	519	WP_003095833.1	shikimate kinase AroK	-
RBI96_RS19660 (RBI96_019660)	pilQ	4207920..4210064 (-)	2145	WP_003095835.1	type 4a pilus secretin PilQ	Machinery gene
RBI96_RS19665 (RBI96_019665)	pilP	4210118..4210642 (-)	525	WP_003095836.1	type 4a pilus biogenesis lipoprotein PilP	-
RBI96_RS19670 (RBI96_019670)	pilO	4210639..4211262 (-)	624	WP_003095838.1	type 4a pilus biogenesis protein PilO	-
RBI96_RS19675 (RBI96_019675)	pilN	4211259..4211855 (-)	597	WP_003095839.1	type 4a pilus biogenesis protein PilN	-
RBI96_RS19680 (RBI96_019680)	pilM	4211855..4212919 (-)	1065	WP_003110888.1	type IV pilus assembly protein PilM	Machinery gene
RBI96_RS19685 (RBI96_019685)	-	4213104..4215575 (+)	2472	WP_003095841.1	penicillin-binding protein 1A	-
RBI96_RS19690 (RBI96_019690)	-	4215671..4216939 (-)	1269	WP_003095842.1	malic enzyme	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37983.48 Da
• Isoelectric Point: 4.5405

>NTDB_id=1097993 RBI96_RS19680 WP_003110888.1 4211855..4212919(-) (pilM) [Pseudomonas aeruginosa strain LACPHL-BACT-2023-00013]
MLGLIKKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKAKTNLKSAVV
AVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFAAGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANP
FADMALNGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=1097993 RBI96_RS19680 WP_003110888.1 4211855..4212919(-) (pilM) [Pseudomonas aeruginosa strain LACPHL-BACT-2023-00013]
GTGCTAGGGCTCATAAAGAAGAAAGCGAACACCTTGCTGGGGATCGACATCAGCTCGACCTCGGTAAAGCTCCTTGAGTT
GAGCCGCTCCGGAGGCCGCTACAAAGTGGAGGCCTATGCCGTCGAGCCGCTTCCGCCGAATGCAGTCGTGGAAAAGAACA
TCGTCGAGCTGGAAGGGGTCGGCCAGGCGTTGTCACGGGTGCTGGTCAAGGCGAAAACCAACCTGAAGTCGGCCGTGGTC
GCCGTCGCCGGTTCGGCGGTGATCACCAAGACCATCGAGATGGAGGCCGGGCTTTCCGAGGATGAACTGGAAAACCAGCT
GAAGATCGAGGCCGACCAGTACATCCCCTATCCGCTGGAGGAAGTCGCCATCGACTTCGAGGTCCAGGGACTCTCCGCGC
GCAATCCCGAGCGCGTGGACGTACTCCTGGCCGCCTGTCGGAAAGAGAACGTCGAGGTTCGCGAAGCGGCCCTGGCGCTG
GCCGGCCTGACCGCCAAGGTGGTCGACGTCGAGGCTTACGCGCTGGAGCGCTCCTATGCGCTGCTGAGCAGCCAGTTGGG
TGCCGACACCGACCAGTTGACCGTGGCGGTAGTGGACATCGGCGCGACCATGACCACCCTGAGCGTCCTGCACAACGGAC
GCACCATCTATACCCGCGAACAGCTGTTCGGCGGTCGCCAGCTCACCGAGGAGATCCAGCGGCGTTACGGACTCTCGGTG
GAGGAAGCCGGTCTCGCCAAGAAGCAGGGTGGTCTTCCGGATGACTACGACAGCGAAGTTCTGCGTCCGTTCAAGGACGC
CGTGGTGCAGCAGGTTTCCCGCTCGCTGCAGTTCTTCTTCGCCGCCGGACAGTTCAACGACGTCGACTACATCGTCCTGG
CGGGCGGTACGGCGTCTATCCAGGATCTCGATCGGTTGATCCAGCAGAAGATCGGCACCCCGACCCTGGTCGCCAACCCG
TTCGCCGACATGGCGCTGAACGGCAAGGTGAATGCCGGCGCCCTGGCCAGCGACGCTCCGGCGTTGATGATCGCCTGCGG
CCTGGCGTTGAGGAGTTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.899	100	0.562
comM	Acinetobacter nosocomialis M2	55.899	100	0.562
comM	Acinetobacter baylyi ADP1	51.977	100	0.52
pilM	Legionella pneumophila strain ERS1305867	46.61	100	0.466