Detailed information NTG0109707

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: ABXH21_RS09825
• Genome accession: NZ_AP031472
• Coordinates: 2192253..2193128 (-)
• Length: 291 a.a.
• NCBI ID: WP_353551314.1
• Uniprot ID: -
• Organism: Moraxella osloensis strain NBRC 115781
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2187253..2198128

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABXH21_RS09805 (SKB0120_19190)	nfuA	2188061..2188678 (-)	618	WP_096489426.1	Fe-S biogenesis protein NfuA	-
ABXH21_RS09810 (SKB0120_19200)	-	2188963..2190066 (+)	1104	WP_353478998.1	bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase	-
ABXH21_RS09815 (SKB0120_19210)	-	2190136..2191542 (+)	1407	WP_065253798.1	nicotinate phosphoribosyltransferase	-
ABXH21_RS09820 (SKB0120_19220)	coaE	2191600..2192256 (-)	657	WP_353551313.1	dephospho-CoA kinase	-
ABXH21_RS09825 (SKB0120_19230)	pilD	2192253..2193128 (-)	876	WP_353551314.1	A24 family peptidase	Machinery gene
ABXH21_RS09830 (SKB0120_19240)	pilC	2193134..2194357 (-)	1224	WP_353551315.1	type II secretion system F family protein	Machinery gene
ABXH21_RS09835 (SKB0120_19250)	pilB	2194414..2196120 (-)	1707	WP_353551317.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ABXH21_RS09840 (SKB0120_19260)	tpiA	2196543..2197382 (+)	840	WP_353551319.1	triose-phosphate isomerase	-
ABXH21_RS09845 (SKB0120_19270)	secG	2197473..2197793 (+)	321	WP_353551321.1	preprotein translocase subunit SecG	-

Sequence

Protein

• Length: 291 a.a.
• Molecular weight: 32266.66 Da
• Isoelectric Point: 7.9324

>NTDB_id=109707 ABXH21_RS09825 WP_353551314.1 2192253..2193128(-) (pilD) [Moraxella osloensis strain NBRC 115781]
MGIFSDFILLLQQSQWLTLIMVSILGLCVGSFLNVVIYRTPLMMEQQWKNECQLLLHPESVIDNHESMTLSRPASRCPHC
GHSIRWFENMPVISWLLLKGKCSQCHHAISYRYPLVEIITAILSVLVVMKFGVTWQALAGLALTWTLVALTGIDFDTQLL
PDRFTLPLAGLGLFVNAFGLFVSPTAAIFGYVFGFLCLWIVYQLFLLITGKHGMGHGDFKLLAALGAWLGPLMLPLIVLL
SAFVGSVVGMILMKRSGESKPFAFGPYIAIAGMIALLYGQSIMSWYLGNMS

Nucleotide

• Length: 876 bp

>NTDB_id=109707 ABXH21_RS09825 WP_353551314.1 2192253..2193128(-) (pilD) [Moraxella osloensis strain NBRC 115781]
ATGGGGATTTTTTCAGATTTTATTTTGTTACTACAACAGTCGCAATGGCTGACGTTGATTATGGTATCAATCTTGGGCTT
GTGTGTGGGTAGTTTTTTAAATGTGGTGATTTATCGCACGCCTTTGATGATGGAGCAGCAGTGGAAGAACGAATGCCAGC
TATTGCTTCATCCAGAAAGCGTTATTGACAATCATGAATCGATGACCTTAAGCCGTCCTGCTTCTCGTTGCCCGCATTGT
GGGCATTCAATACGTTGGTTTGAAAATATGCCTGTTATTAGTTGGCTACTGCTAAAAGGAAAATGTAGTCAGTGTCATCA
CGCCATTAGTTATCGCTATCCGCTTGTGGAAATCATCACCGCTATTTTGTCTGTGCTGGTGGTGATGAAATTTGGTGTTA
CTTGGCAAGCGCTAGCAGGGTTAGCACTCACATGGACATTAGTCGCTTTGACAGGCATTGATTTTGATACCCAGTTGTTG
CCTGACCGATTTACATTGCCATTAGCGGGATTAGGATTATTCGTCAATGCCTTTGGCTTGTTTGTCAGTCCCACAGCGGC
TATTTTTGGCTATGTGTTTGGGTTTTTATGCTTGTGGATTGTCTACCAACTGTTTTTGCTGATTACGGGCAAGCACGGGA
TGGGGCATGGTGATTTTAAATTATTAGCGGCTTTGGGGGCTTGGCTAGGGCCTTTGATGCTACCCTTAATTGTGCTTTTA
TCTGCGTTTGTCGGCTCGGTTGTGGGTATGATATTGATGAAGCGCTCAGGTGAGAGCAAACCTTTTGCATTTGGACCCTA
TATCGCGATTGCTGGCATGATAGCACTTTTGTATGGGCAATCAATAATGTCGTGGTATCTAGGCAACATGTCATGA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (24-131)

• Type IV leader peptidase family (Peptidase_A24) (142-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter baumannii D1279779	62.676	97.595	0.612
pilD	Acinetobacter nosocomialis M2	62.676	97.595	0.612
pilD	Vibrio campbellii strain DS40M4	48.239	97.595	0.471
pilD	Vibrio cholerae strain A1552	48.54	94.158	0.457
pilD	Neisseria gonorrhoeae MS11	44.815	92.784	0.416