Detailed information    

insolico Bioinformatically predicted

Overview


Name   degS   Type   Regulator
Locus tag   ACK2OW_RS08775 Genome accession   NZ_CP180575
Coordinates   1615653..1616810 (-) Length   385 a.a.
NCBI ID   WP_003227983.1    Uniprot ID   A0A199WDV9
Organism   Bacillus subtilis strain K3C     
Function   phosphorylation of DegU (predicted from homology)   
Competence regulation

Genomic Context


Location: 1610653..1621810
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACK2OW_RS08745 (ACK2OW_08745) yvyF 1610906..1611325 (-) 420 WP_003227995.1 TIGR03826 family flagellar region protein -
  ACK2OW_RS08750 (ACK2OW_08750) comFC 1611399..1612121 (-) 723 WP_014481051.1 comF operon protein ComFC Machinery gene
  ACK2OW_RS08755 (ACK2OW_08755) comFB 1612085..1612381 (-) 297 WP_003227989.1 late competence protein ComFB -
  ACK2OW_RS08760 (ACK2OW_08760) comFA 1612441..1613832 (-) 1392 WP_014481052.1 ATP-dependent helicase ComFA Machinery gene
  ACK2OW_RS08765 (ACK2OW_08765) fakBA 1613938..1614783 (-) 846 WP_014481053.1 DegV family protein -
  ACK2OW_RS08770 (ACK2OW_08770) degU 1614881..1615570 (-) 690 WP_003219701.1 two-component system response regulator DegU Regulator
  ACK2OW_RS08775 (ACK2OW_08775) degS 1615653..1616810 (-) 1158 WP_003227983.1 two-component sensor histidine kinase DegS Regulator
  ACK2OW_RS08780 (ACK2OW_08780) yvyE 1617027..1617680 (+) 654 WP_003227979.1 YigZ family protein -
  ACK2OW_RS08785 (ACK2OW_08785) tagV 1617680..1618855 (+) 1176 WP_072173456.1 polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV -
  ACK2OW_RS08790 (ACK2OW_08790) tagO 1618928..1620004 (-) 1077 WP_003227975.1 MraY family glycosyltransferase -
  ACK2OW_RS08795 (ACK2OW_08795) tuaH 1620149..1621342 (-) 1194 WP_411225173.1 teichuronic acid biosynthesis protein TuaH -

Sequence


Protein


Download         Length: 385 a.a.        Molecular weight: 44957.76 Da        Isoelectric Point: 6.2957

>NTDB_id=1096773 ACK2OW_RS08775 WP_003227983.1 1615653..1616810(-) (degS) [Bacillus subtilis strain K3C]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide


Download         Length: 1158 bp        

>NTDB_id=1096773 ACK2OW_RS08775 WP_003227983.1 1615653..1616810(-) (degS) [Bacillus subtilis strain K3C]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTCGAAGAACTGAAACAAATTAAACAGCAGG
TGTATGAAGTGATCGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGACGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTCAACTACTTGAATCAGGATTTGCGCGAAGTTGGACTGCTTCTT
GCTGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTCTCAAGAGA
AATCCATGACGGACCAGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GCGCAGAGGACGGATTCCAAGAAATTAAAAATCTACGCCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAGGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGCATTGGAGAAACAGAGGATCAGAGGCTAGCGCCTCAGTTTGAGGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAGATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A199WDV9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degS Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment