Detailed information NTG1096172

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: ACMZ68_RS01575
• Genome accession: NZ_CP180522
• Coordinates: 326430..327290 (-)
• Length: 286 a.a.
• NCBI ID: WP_415871635.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain AP5091
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 321430..332290

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMZ68_RS01550 (ACMZ68_01550)	-	322320..323630 (+)	1311	WP_415871634.1	tetratricopeptide repeat protein	-
ACMZ68_RS01555 (ACMZ68_01555)	-	323707..324033 (+)	327	WP_002115102.1	pyrimidine/purine nucleoside phosphorylase	-
ACMZ68_RS01560 (ACMZ68_01560)	rlmB	324136..324885 (+)	750	WP_005079348.1	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	-
ACMZ68_RS01565 (ACMZ68_01565)	-	324921..325835 (+)	915	WP_032038060.1	DMT family transporter	-
ACMZ68_RS01570 (ACMZ68_01570)	coaE	325832..326428 (-)	597	WP_002115011.1	dephospho-CoA kinase	-
ACMZ68_RS01575 (ACMZ68_01575)	pilD	326430..327290 (-)	861	WP_415871635.1	prepilin peptidase	Machinery gene
ACMZ68_RS01580 (ACMZ68_01580)	pilC	327290..328516 (-)	1227	WP_342370950.1	type II secretion system F family protein	Machinery gene
ACMZ68_RS01585 (ACMZ68_01585)	pilB	328543..330255 (-)	1713	WP_415871636.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACMZ68_RS01590 (ACMZ68_01590)	tpiA	330547..331341 (+)	795	WP_206261281.1	triose-phosphate isomerase	-
ACMZ68_RS01595 (ACMZ68_01595)	secG	331354..331683 (+)	330	WP_002115012.1	preprotein translocase subunit SecG	-

Sequence

Protein

• Length: 286 a.a.
• Molecular weight: 32124.65 Da
• Isoelectric Point: 7.1786

>NTDB_id=1096172 ACMZ68_RS01575 WP_415871635.1 326430..327290(-) (pilD) [Acinetobacter pittii strain AP5091]
MHEIIAYFIQNLTALYIAVALLSLCIGSFLNVVIYRTPKMMEQDWQQECQMLLNPELPIIEHEKLTLSKPASSCPACQQP
IRWYQNIPVISWLMLRGKCGHCQHPISIRYPAIELLTMLCSLVVVMVFGATLQMLWGLVLTWILIALTFIDFDTQLLPDR
FTLPLAALGLGINTFSIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSL
LGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG

Nucleotide

• Length: 861 bp

>NTDB_id=1096172 ACMZ68_RS01575 WP_415871635.1 326430..327290(-) (pilD) [Acinetobacter pittii strain AP5091]
ATGCATGAAATTATTGCTTATTTTATTCAAAACTTAACTGCACTTTATATTGCAGTCGCACTATTGAGCCTATGTATTGG
TAGCTTTTTGAATGTGGTAATTTATCGCACCCCCAAAATGATGGAACAAGATTGGCAGCAGGAATGTCAAATGTTGCTTA
ATCCCGAACTACCCATCATTGAGCATGAAAAGCTGACATTAAGTAAACCTGCTTCATCATGTCCTGCATGTCAGCAACCG
ATCCGTTGGTATCAAAATATTCCAGTTATAAGCTGGTTAATGTTAAGAGGAAAATGTGGCCATTGCCAACATCCTATTAG
CATTCGTTATCCAGCGATTGAATTACTCACGATGCTATGTTCATTAGTAGTCGTCATGGTTTTTGGTGCAACCCTACAAA
TGCTTTGGGGGCTAGTGCTCACTTGGATTTTGATTGCTTTAACATTTATAGACTTTGATACTCAGCTACTACCTGACCGT
TTCACCCTACCTTTGGCTGCGCTCGGCTTAGGTATTAATACCTTTAGTATTTACACCTCGCCTAACTCAGCCATTTGGGG
ATATTTAATCGGCTTTTTATGTCTTTGGATTGTGTATTACTTATTTAAAGTGATTACAGGCAAAGAAGGTATGGGCTACG
GCGACTTTAAATTGCTTGCCGCATTAGGCGCGTGGATGGGACCATTGATGCTGCCATTAATTGTGCTATTGTCATCTTTA
CTCGGTGCAATTATTGGCATCATTTTACTAAAATTACGTAATGATAATCAGCCCTTTGCGTTTGGGCCATATATTGCCAT
TGCGGGTTGGGTTGCCTTTTTATGGGGTGACCAAATTATGAAAATTTATTTGGGAGGTTAA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (21-128)

• Type IV leader peptidase family (Peptidase_A24) (138-247)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter baumannii D1279779	95.455	100	0.955
pilD	Acinetobacter nosocomialis M2	95.105	100	0.951
pilD	Vibrio cholerae strain A1552	54.212	95.455	0.517
pilD	Vibrio campbellii strain DS40M4	53.309	95.105	0.507
pilD	Neisseria gonorrhoeae MS11	47.71	91.608	0.437