Detailed information
Bioinformatically predicted
Overview
| Name | comGC | Type | Machinery gene |
| Locus tag | ACMX77_RS13530 | Genome accession | NZ_CP180438 |
| Coordinates | 2576863..2577159 (-) | Length | 98 a.a. |
| NCBI ID | WP_014477332.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain W-2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2571863..2582159
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMX77_RS13485 (ACMX77_13485) | tasA | 2572272..2573057 (-) | 786 | WP_003230183.1 | biofilm matrix protein TasA | - |
| ACMX77_RS13490 (ACMX77_13490) | sipW | 2573121..2573693 (-) | 573 | WP_080030740.1 | signal peptidase I SipW | - |
| ACMX77_RS13495 (ACMX77_13495) | tapA | 2573677..2574438 (-) | 762 | WP_047182870.1 | amyloid fiber anchoring/assembly protein TapA | - |
| ACMX77_RS13500 (ACMX77_13500) | yqzG | 2574708..2575034 (+) | 327 | WP_047183570.1 | YqzG/YhdC family protein | - |
| ACMX77_RS13505 (ACMX77_13505) | spoIITA | 2575076..2575255 (-) | 180 | WP_003230176.1 | YqzE family protein | - |
| ACMX77_RS13510 (ACMX77_13510) | comGG | 2575327..2575701 (-) | 375 | WP_014480253.1 | ComG operon protein ComGG | Machinery gene |
| ACMX77_RS13515 (ACMX77_13515) | comGF | 2575702..2576085 (-) | 384 | WP_015384087.1 | ComG operon protein ComGF | Machinery gene |
| ACMX77_RS13520 (ACMX77_13520) | comGE | 2576111..2576458 (-) | 348 | WP_047182872.1 | ComG operon protein 5 | Machinery gene |
| ACMX77_RS13525 (ACMX77_13525) | comGD | 2576442..2576873 (-) | 432 | WP_015384089.1 | comG operon protein ComGD | Machinery gene |
| ACMX77_RS13530 (ACMX77_13530) | comGC | 2576863..2577159 (-) | 297 | WP_014477332.1 | comG operon protein ComGC | Machinery gene |
| ACMX77_RS13535 (ACMX77_13535) | comGB | 2577173..2578210 (-) | 1038 | WP_047182873.1 | comG operon protein ComGB | Machinery gene |
| ACMX77_RS13540 (ACMX77_13540) | comGA | 2578197..2579267 (-) | 1071 | WP_015483431.1 | competence protein ComGA | Machinery gene |
| ACMX77_RS13545 (ACMX77_13545) | corA | 2579677..2580630 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| ACMX77_RS13550 (ACMX77_13550) | yqhB | 2580773..2582101 (+) | 1329 | WP_003230150.1 | hemolysin family protein | - |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10830.69 Da Isoelectric Point: 6.4730
>NTDB_id=1095805 ACMX77_RS13530 WP_014477332.1 2576863..2577159(-) (comGC) [Bacillus subtilis strain W-2]
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKHIIITGGEVKVEH
MNEKGFTLVEMLIVLFIISILLLITIPNVTKHNQTIQKKGCEGLQNMVKAQMTAFELDHEGQTPSLADLQSEGYVKKDAV
CPNGKHIIITGGEVKVEH
Nucleotide
Download Length: 297 bp
>NTDB_id=1095805 ACMX77_RS13530 WP_014477332.1 2576863..2577159(-) (comGC) [Bacillus subtilis strain W-2]
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATTGTGCTCTTTATTATTTCGATCTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCCTACAAAACATGGTTAAGGCACAAATGACCG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGGAAGCACATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
ATGAATGAGAAAGGATTTACACTTGTTGAAATGTTAATTGTGCTCTTTATTATTTCGATCTTGCTTTTAATTACGATACC
GAACGTCACGAAACATAATCAAACCATTCAAAAAAAGGGCTGTGAAGGCCTACAAAACATGGTTAAGGCACAAATGACCG
CATTTGAGCTTGATCATGAAGGACAAACTCCGAGCCTTGCCGATTTACAGTCAGAGGGCTATGTGAAAAAGGATGCTGTC
TGTCCAAATGGGAAGCACATTATCATCACCGGCGGAGAAGTTAAGGTTGAACATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGC | Bacillus subtilis subsp. subtilis str. 168 |
98.98 |
100 |
0.99 |
| comGC | Staphylococcus aureus MW2 |
41.304 |
93.878 |
0.388 |
| comGC | Staphylococcus aureus N315 |
41.304 |
93.878 |
0.388 |
| comYC | Streptococcus suis isolate S10 |
49.333 |
76.531 |
0.378 |