Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | ACMVO4_RS13470 | Genome accession | NZ_CP180205 |
| Coordinates | 2937990..2938640 (+) | Length | 216 a.a. |
| NCBI ID | WP_069667423.1 | Uniprot ID | A0A178JCY9 |
| Organism | Vibrio europaeus strain EX1 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2932990..2943640
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACMVO4_RS13455 (ACMVO4_13455) | - | 2933536..2934978 (-) | 1443 | WP_414931526.1 | MSHA biogenesis protein MshI | - |
| ACMVO4_RS13460 (ACMVO4_13460) | csrD | 2934987..2937005 (-) | 2019 | WP_272279609.1 | RNase E specificity factor CsrD | - |
| ACMVO4_RS13465 (ACMVO4_13465) | ssb | 2937170..2937706 (-) | 537 | WP_069667424.1 | single-stranded DNA-binding protein | Machinery gene |
| ACMVO4_RS13470 (ACMVO4_13470) | qstR | 2937990..2938640 (+) | 651 | WP_069667423.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| ACMVO4_RS13475 (ACMVO4_13475) | galU | 2938759..2939634 (+) | 876 | WP_171383325.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ACMVO4_RS13480 (ACMVO4_13480) | uvrA | 2939776..2942598 (+) | 2823 | WP_171383326.1 | excinuclease ABC subunit UvrA | - |
Sequence
Protein
Download Length: 216 a.a. Molecular weight: 25012.04 Da Isoelectric Point: 8.7415
>NTDB_id=1094521 ACMVO4_RS13470 WP_069667423.1 2937990..2938640(+) (qstR) [Vibrio europaeus strain EX1]
MAKNIYARTIYFLTENKSVNPIIERLERRMEIAIPTMAPDDLLLALQQYKHRILIIDYQEYTQLKNVISELPLADKSFET
IIFNVSHRLTTDELLAFGHLKAVFYQDLDIEQLVKGYEGVINGETWLPRKVTAQLLFHYRNVVDTHTTPATVDLTTREMQ
ILRCLMSGASNTQIADDMFISEFTVKSHLQKVFKKLSVKNRVQAAAWAKQHMRPLS
MAKNIYARTIYFLTENKSVNPIIERLERRMEIAIPTMAPDDLLLALQQYKHRILIIDYQEYTQLKNVISELPLADKSFET
IIFNVSHRLTTDELLAFGHLKAVFYQDLDIEQLVKGYEGVINGETWLPRKVTAQLLFHYRNVVDTHTTPATVDLTTREMQ
ILRCLMSGASNTQIADDMFISEFTVKSHLQKVFKKLSVKNRVQAAAWAKQHMRPLS
Nucleotide
Download Length: 651 bp
>NTDB_id=1094521 ACMVO4_RS13470 WP_069667423.1 2937990..2938640(+) (qstR) [Vibrio europaeus strain EX1]
ATGGCTAAAAACATCTATGCACGAACTATTTACTTTCTCACAGAAAACAAGTCTGTAAATCCAATCATTGAACGTTTAGA
GAGACGAATGGAGATCGCTATTCCGACAATGGCACCCGATGATTTGTTACTCGCCCTACAGCAGTATAAACACCGCATCT
TAATTATTGATTACCAAGAATACACCCAACTCAAAAACGTAATTAGTGAACTCCCATTGGCAGACAAATCATTTGAAACC
ATCATTTTTAATGTCTCTCATCGCTTGACCACAGACGAGCTATTGGCATTTGGTCACTTGAAAGCAGTCTTCTATCAAGA
CTTAGATATAGAGCAACTCGTCAAGGGGTATGAAGGGGTTATCAATGGTGAAACTTGGTTACCAAGAAAAGTTACGGCGC
AGTTACTGTTCCACTACCGTAATGTGGTTGACACCCATACCACTCCCGCAACCGTCGACTTGACCACTAGAGAAATGCAG
ATCCTACGTTGTTTAATGTCTGGAGCTTCCAATACCCAAATCGCAGACGATATGTTTATCAGTGAGTTCACCGTTAAATC
TCATTTGCAGAAGGTTTTTAAGAAATTAAGCGTCAAGAATCGCGTTCAAGCGGCCGCTTGGGCAAAACAACATATGAGAC
CACTGTCTTAA
ATGGCTAAAAACATCTATGCACGAACTATTTACTTTCTCACAGAAAACAAGTCTGTAAATCCAATCATTGAACGTTTAGA
GAGACGAATGGAGATCGCTATTCCGACAATGGCACCCGATGATTTGTTACTCGCCCTACAGCAGTATAAACACCGCATCT
TAATTATTGATTACCAAGAATACACCCAACTCAAAAACGTAATTAGTGAACTCCCATTGGCAGACAAATCATTTGAAACC
ATCATTTTTAATGTCTCTCATCGCTTGACCACAGACGAGCTATTGGCATTTGGTCACTTGAAAGCAGTCTTCTATCAAGA
CTTAGATATAGAGCAACTCGTCAAGGGGTATGAAGGGGTTATCAATGGTGAAACTTGGTTACCAAGAAAAGTTACGGCGC
AGTTACTGTTCCACTACCGTAATGTGGTTGACACCCATACCACTCCCGCAACCGTCGACTTGACCACTAGAGAAATGCAG
ATCCTACGTTGTTTAATGTCTGGAGCTTCCAATACCCAAATCGCAGACGATATGTTTATCAGTGAGTTCACCGTTAAATC
TCATTTGCAGAAGGTTTTTAAGAAATTAAGCGTCAAGAATCGCGTTCAAGCGGCCGCTTGGGCAAAACAACATATGAGAC
CACTGTCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio campbellii strain DS40M4 |
52.83 |
98.148 |
0.519 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
52.358 |
98.148 |
0.514 |
| qstR | Vibrio cholerae strain A1552 |
48.826 |
98.611 |
0.481 |