Detailed information NTG1093995

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACMG4O_RS00540
• Genome accession: NZ_CP179934
• Coordinates: 116238..117305 (-)
• Length: 355 a.a.
• NCBI ID: WP_370203057.1
• Uniprot ID: -
• Organism: Alloalcanivorax venustensis strain A6
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 111238..122305

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMG4O_RS00515 (ACMG4O_00515)	aroK	111715..112248 (-)	534	WP_255442310.1	shikimate kinase AroK	-
ACMG4O_RS00520 (ACMG4O_00520)	-	112245..114392 (-)	2148	WP_414434170.1	type IV pilus secretin PilQ	-
ACMG4O_RS00525 (ACMG4O_00525)	-	114414..114950 (-)	537	WP_370203060.1	pilus assembly protein PilP	-
ACMG4O_RS00530 (ACMG4O_00530)	-	114962..115648 (-)	687	WP_370203059.1	type 4a pilus biogenesis protein PilO	-
ACMG4O_RS00535 (ACMG4O_00535)	-	115645..116241 (-)	597	WP_370203058.1	PilN domain-containing protein	-
ACMG4O_RS00540 (ACMG4O_00540)	pilM	116238..117305 (-)	1068	WP_370203057.1	pilus assembly protein PilM	Machinery gene
ACMG4O_RS00545 (ACMG4O_00545)	-	117503..120040 (+)	2538	WP_370203056.1	penicillin-binding protein 1A	-
ACMG4O_RS00550 (ACMG4O_00550)	-	120125..121399 (-)	1275	WP_414434171.1	malic enzyme-like NAD(P)-binding protein	-
ACMG4O_RS00555 (ACMG4O_00555)	rpmE	121531..121752 (-)	222	WP_067612876.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38821.21 Da
• Isoelectric Point: 4.3086

>NTDB_id=1093995 ACMG4O_RS00540 WP_370203057.1 116238..117305(-) (pilM) [Alloalcanivorax venustensis strain A6]
MLPFLRKKAQTLLGIDISSTAVKLLELSRTGNRYKVESYGVEPLTPNAVVEKNINDVEGVGDVVARLVGRARPGIKTSAV
AVPGSATITKVIEMDASLSEDDMENQLRVEADQYIPFPLDEVRMDFQVIGPVEDNPERVEVLVVASRTENVEMRADALEI
GGLQPKVVDVEAYAMERAFQLILPGLPNAEELDTVAVFDIGATMTTLNVFHQGRSVYTREQLFGGKQLTEEIQRRYGISM
EEAGLAKKTGELPEDYENEVLQPFKDAIVQQINRSLQFFYGSTQFNEVNYILLAGGSASIDGLPDLIQQKVGTGCSLANP
FADMALANKVNAKALENDASAMMIACGLALRSFEQ

Nucleotide

• Length: 1068 bp

>NTDB_id=1093995 ACMG4O_RS00540 WP_370203057.1 116238..117305(-) (pilM) [Alloalcanivorax venustensis strain A6]
GTGCTGCCTTTTCTCAGAAAAAAGGCCCAGACACTGCTGGGGATCGATATCAGTTCCACCGCGGTTAAGTTGCTGGAATT
GTCCAGAACGGGGAACCGCTACAAGGTCGAAAGTTACGGCGTCGAACCGCTAACGCCAAACGCCGTGGTGGAAAAGAACA
TCAATGACGTTGAGGGGGTCGGGGATGTGGTCGCCCGTCTGGTGGGCCGTGCCCGTCCGGGGATCAAGACGTCCGCGGTG
GCCGTGCCCGGCTCGGCGACCATCACCAAGGTGATTGAAATGGACGCCTCGCTGAGCGAGGACGACATGGAAAATCAGCT
TCGGGTGGAAGCCGACCAGTACATTCCCTTCCCGCTGGACGAGGTCCGCATGGACTTCCAGGTGATCGGCCCGGTGGAGG
ACAACCCGGAGAGGGTGGAAGTGCTGGTGGTGGCGTCCCGCACCGAGAACGTGGAAATGCGCGCCGATGCCCTGGAGATC
GGCGGGCTGCAGCCGAAGGTGGTGGATGTGGAGGCCTACGCCATGGAGCGGGCCTTCCAGCTGATCCTGCCCGGCCTGCC
CAACGCCGAGGAGCTGGACACCGTGGCGGTGTTCGATATCGGCGCCACCATGACCACGCTCAATGTGTTCCACCAGGGGC
GCAGCGTCTACACCCGCGAGCAGTTGTTCGGCGGCAAGCAGCTCACCGAGGAAATCCAGCGCCGCTACGGCATCTCCATG
GAGGAGGCCGGGCTGGCCAAGAAGACCGGCGAGCTGCCGGAGGACTACGAAAACGAGGTCCTGCAGCCGTTCAAGGACGC
CATCGTCCAGCAGATCAACCGCTCCCTGCAGTTCTTCTACGGCTCCACCCAGTTCAACGAAGTGAACTATATCCTGCTCG
CCGGCGGCTCCGCCTCGATTGACGGACTGCCCGACCTGATTCAGCAAAAGGTGGGCACCGGATGCTCCCTGGCCAATCCC
TTCGCCGATATGGCATTGGCCAACAAGGTTAACGCCAAGGCGCTCGAGAACGACGCGTCCGCGATGATGATCGCCTGTGG
CCTGGCCCTGAGGAGCTTCGAGCAATGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	55.932	99.718	0.558
comM	Acinetobacter nosocomialis M2	55.932	99.718	0.558
comM	Acinetobacter baylyi ADP1	54.366	100	0.544
pilM	Legionella pneumophila strain ERS1305867	46.328	99.718	0.462