Detailed information NTG1093991

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACMG4L_RS14995
• Genome accession: NZ_CP179933
• Coordinates: 3181041..3182108 (+)
• Length: 355 a.a.
• NCBI ID: WP_414430317.1
• Uniprot ID: -
• Organism: Alcanivorax sp. IL1
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3176041..3187108

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMG4L_RS14980 (ACMG4L_14980)	rpmE	3176492..3176710 (+)	219	WP_414433397.1	50S ribosomal protein L31	-
ACMG4L_RS14985 (ACMG4L_14985)	-	3176839..3178113 (+)	1275	WP_035245137.1	malic enzyme-like NAD(P)-binding protein	-
ACMG4L_RS14990 (ACMG4L_14990)	-	3178263..3180842 (-)	2580	WP_272962151.1	penicillin-binding protein 1A	-
ACMG4L_RS14995 (ACMG4L_14995)	pilM	3181041..3182108 (+)	1068	WP_414430317.1	pilus assembly protein PilM	Machinery gene
ACMG4L_RS15000 (ACMG4L_15000)	-	3182105..3182674 (+)	570	WP_035245131.1	PilN domain-containing protein	-
ACMG4L_RS15005 (ACMG4L_15005)	-	3182671..3183357 (+)	687	WP_156964814.1	type 4a pilus biogenesis protein PilO	-
ACMG4L_RS15010 (ACMG4L_15010)	-	3183365..3183892 (+)	528	WP_052042465.1	pilus assembly protein PilP	-
ACMG4L_RS15015 (ACMG4L_15015)	pilQ	3183909..3186056 (+)	2148	WP_414430316.1	type IV pilus secretin PilQ	-
ACMG4L_RS15020 (ACMG4L_15020)	aroK	3186053..3186586 (+)	534	WP_035245129.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38399.65 Da
• Isoelectric Point: 4.2720

>NTDB_id=1093991 ACMG4L_RS14995 WP_414430317.1 3181041..3182108(+) (pilM) [Alcanivorax sp. IL1]
MLPFLRKKAQTLLGIDISSTAVKLLELSKSGNRYKVESYGVEPLPANAVVEKNISDVEGVGDAIARLVSRARPGVKAAAV
AVSGSAVITKLIEMDASLNEDELESQLKVEADQYIPFPLDEVRMDFQVMGPVEGNDERVEVLVAASRTENVEMRTDALEI
GGLQAKAVDVEAYAMERAFQLVLPGLPNAEELQTVAVFDIGATMTTLNVFHQGRSVYTREQLFGGKQLTEEIQRRYGISM
EEAGLAKKTGELPDDYEAEVLQPFKDAVVQQVNRSLQFFYGSTQFNEVDYILLAGGSASIQDLAELIQEKVGANCSVANP
FSDMALANKVGASAIANDAPALMIACGLALRSFDQ

Nucleotide

• Length: 1068 bp

>NTDB_id=1093991 ACMG4L_RS14995 WP_414430317.1 3181041..3182108(+) (pilM) [Alcanivorax sp. IL1]
GTGCTGCCTTTCCTCAGAAAAAAGGCCCAGACACTACTGGGGATCGACATAAGCTCCACGGCGGTGAAGCTGCTCGAGCT
GTCGAAATCGGGGAACCGCTACAAGGTCGAAAGCTATGGGGTTGAGCCCCTGCCGGCCAACGCGGTTGTCGAAAAAAACA
TCAGTGACGTGGAGGGCGTCGGGGATGCTATCGCCCGTCTGGTGAGCCGCGCCCGTCCCGGGGTCAAAGCCGCGGCGGTG
GCGGTGTCCGGCTCTGCCGTGATCACCAAGCTGATTGAAATGGACGCCTCTCTCAACGAAGACGAGCTGGAAAGCCAGCT
GAAAGTGGAGGCGGATCAGTACATCCCTTTCCCGCTGGATGAAGTGCGTATGGACTTCCAGGTCATGGGGCCTGTTGAAG
GTAATGACGAGCGCGTGGAAGTGCTTGTGGCAGCGTCTCGCACCGAAAACGTGGAAATGCGGACCGACGCTCTGGAGATT
GGTGGCTTGCAGGCCAAGGCGGTGGATGTGGAAGCCTATGCCATGGAGCGGGCTTTCCAGCTTGTGCTGCCGGGTCTGCC
CAACGCTGAGGAGCTGCAGACCGTGGCGGTCTTTGATATCGGTGCCACCATGACCACGTTGAACGTCTTTCATCAGGGTC
GCAGCGTCTATACTCGTGAGCAGTTGTTTGGTGGTAAGCAGCTGACCGAAGAAATTCAGCGGCGTTATGGTATTTCCATG
GAGGAGGCTGGCCTGGCCAAGAAAACCGGTGAATTGCCCGATGATTATGAGGCGGAAGTCCTTCAGCCCTTCAAAGATGC
TGTCGTTCAGCAAGTCAATCGCTCCTTGCAATTTTTCTACGGCTCCACCCAGTTCAATGAGGTGGACTATATCCTGTTGG
CCGGCGGGTCGGCTTCTATCCAGGATCTGGCAGAGCTAATCCAGGAGAAGGTTGGTGCCAACTGTTCCGTGGCCAACCCG
TTCAGTGATATGGCACTGGCAAACAAAGTGGGAGCCTCTGCCATTGCCAATGATGCGCCAGCACTGATGATCGCCTGCGG
CCTGGCATTGAGGAGCTTTGACCAATGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	56.497	99.718	0.563
comM	Acinetobacter nosocomialis M2	56.497	99.718	0.563
comM	Acinetobacter baylyi ADP1	54.085	100	0.541
pilM	Legionella pneumophila strain ERS1305867	46.61	99.718	0.465