Detailed information NTG1093952

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACMG4N_RS05275
• Genome accession: NZ_CP179932
• Coordinates: 1120388..1121455 (+)
• Length: 355 a.a.
• NCBI ID: WP_297769679.1
• Uniprot ID: -
• Organism: Alcanivorax sp. IL2
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1115388..1126455

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMG4N_RS05260 (ACMG4N_05260)	rpmE	1115806..1116024 (+)	219	WP_035245139.1	50S ribosomal protein L31	-
ACMG4N_RS05265 (ACMG4N_05265)	-	1116153..1117427 (+)	1275	WP_290536358.1	malic enzyme-like NAD(P)-binding protein	-
ACMG4N_RS05270 (ACMG4N_05270)	-	1117613..1120189 (-)	2577	WP_414433043.1	penicillin-binding protein 1A	-
ACMG4N_RS05275 (ACMG4N_05275)	pilM	1120388..1121455 (+)	1068	WP_297769679.1	pilus assembly protein PilM	Machinery gene
ACMG4N_RS05280 (ACMG4N_05280)	-	1121452..1122021 (+)	570	WP_297769682.1	PilN domain-containing protein	-
ACMG4N_RS05285 (ACMG4N_05285)	-	1122018..1122695 (+)	678	WP_297769685.1	type 4a pilus biogenesis protein PilO	-
ACMG4N_RS05290 (ACMG4N_05290)	-	1122705..1123241 (+)	537	WP_297769687.1	pilus assembly protein PilP	-
ACMG4N_RS05295 (ACMG4N_05295)	pilQ	1123262..1125424 (+)	2163	WP_297769689.1	type IV pilus secretin PilQ family protein	-
ACMG4N_RS05300 (ACMG4N_05300)	aroK	1125421..1125954 (+)	534	WP_297769691.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38394.64 Da
• Isoelectric Point: 4.2510

>NTDB_id=1093952 ACMG4N_RS05275 WP_297769679.1 1120388..1121455(+) (pilM) [Alcanivorax sp. IL2]
MLPFLRKKAQTLLGIDISSTAVKLLELSKSGNRYKVESYGVEPLPANAVVEKNISDVEGVGDAIARLVSRARPGVKTAAV
AVSGSAVITKLIEMDASLSEDEMESQLKVEADQYIPFPLDEVRMDFQVMGPVEGNDERVEVLVAASRTENVEMRTDALEI
GGLQAKAVDVEAYAMERAFQLVLPGLPNAEELETVAVFDIGATMTTLNVFHQGRSVYTREQLFGGKQLTEEIQRRYGISM
EEAGLAKKTGELPDDYEAEVLQPFKDAVVQQVNRSLQFFYGSTQFNEVDYILLAGGSASIQDLAELIQEKVGASCSVANP
FSDMALANKVGASAIANDAPALMIACGLALRSFDQ

Nucleotide

• Length: 1068 bp

>NTDB_id=1093952 ACMG4N_RS05275 WP_297769679.1 1120388..1121455(+) (pilM) [Alcanivorax sp. IL2]
GTGCTGCCTTTCCTCAGAAAAAAGGCCCAGACACTACTGGGGATCGACATCAGCTCCACGGCGGTGAAGCTGCTCGAGCT
GTCGAAATCGGGGAACCGCTACAAGGTCGAAAGCTATGGGGTTGAGCCCCTGCCGGCCAACGCGGTTGTCGAAAAAAACA
TCAGTGACGTGGAGGGCGTCGGGGATGCTATTGCCCGTCTGGTCAGCCGCGCCCGTCCCGGGGTGAAAACCGCCGCGGTG
GCAGTGTCCGGCTCCGCCGTGATCACCAAGCTGATTGAAATGGATGCCTCTCTCAGTGAAGACGAGATGGAAAGTCAGCT
GAAAGTGGAGGCGGATCAGTATATCCCTTTCCCGCTGGATGAAGTCCGTATGGACTTCCAGGTCATGGGGCCAGTTGAAG
GTAACGACGAGCGCGTGGAAGTGCTTGTGGCGGCCTCGCGCACAGAAAACGTGGAAATGCGCACCGACGCTCTGGAGATT
GGTGGCTTGCAGGCCAAGGCGGTGGATGTGGAGGCCTACGCCATGGAACGGGCCTTCCAGCTGGTGCTGCCGGGTCTGCC
TAACGCCGAGGAGCTGGAGACCGTGGCGGTCTTCGATATCGGTGCCACCATGACCACTCTGAACGTTTTCCACCAGGGGC
GCAGCGTCTATACCCGTGAGCAGTTGTTTGGTGGCAAGCAGCTGACCGAAGAAATTCAGCGGCGTTACGGCATTTCCATG
GAAGAAGCCGGTCTGGCCAAGAAAACCGGTGAGCTGCCCGATGATTATGAGGCGGAAGTCCTTCAGCCGTTCAAGGATGC
TGTCGTTCAGCAAGTCAATCGCTCTCTGCAATTTTTCTACGGCTCCACCCAGTTCAATGAGGTGGACTATATCCTGCTGG
CCGGGGGGTCGGCTTCTATCCAGGATCTGGCAGAGCTGATTCAGGAGAAGGTGGGTGCCAGCTGTTCCGTGGCAAACCCA
TTCAGTGATATGGCACTGGCAAACAAGGTGGGAGCATCTGCCATTGCCAATGATGCGCCGGCACTGATGATCGCCTGCGG
CTTGGCATTGAGGAGCTTTGACCAATGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	56.78	99.718	0.566
comM	Acinetobacter nosocomialis M2	56.78	99.718	0.566
comM	Acinetobacter baylyi ADP1	54.085	100	0.541
pilM	Legionella pneumophila strain ERS1305867	46.893	99.718	0.468