Detailed information NTG1093943

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACMG4M_RS15035
• Genome accession: NZ_CP179931
• Coordinates: 3236437..3237504 (-)
• Length: 355 a.a.
• NCBI ID: WP_414430317.1
• Uniprot ID: -
• Organism: Alcanivorax sp. IL3
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3231437..3242504

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACMG4M_RS15010 (ACMG4M_15010)	aroK	3231959..3232492 (-)	534	WP_035245129.1	shikimate kinase AroK	-
ACMG4M_RS15015 (ACMG4M_15015)	pilQ	3232489..3234636 (-)	2148	WP_414430316.1	type IV pilus secretin PilQ	-
ACMG4M_RS15020 (ACMG4M_15020)	-	3234653..3235180 (-)	528	WP_052042465.1	pilus assembly protein PilP	-
ACMG4M_RS15025 (ACMG4M_15025)	-	3235188..3235874 (-)	687	WP_156964814.1	type 4a pilus biogenesis protein PilO	-
ACMG4M_RS15030 (ACMG4M_15030)	-	3235871..3236440 (-)	570	WP_035245131.1	PilN domain-containing protein	-
ACMG4M_RS15035 (ACMG4M_15035)	pilM	3236437..3237504 (-)	1068	WP_414430317.1	pilus assembly protein PilM	Machinery gene
ACMG4M_RS15040 (ACMG4M_15040)	-	3237703..3240282 (+)	2580	WP_272962151.1	penicillin-binding protein 1A	-
ACMG4M_RS15045 (ACMG4M_15045)	-	3240432..3241706 (-)	1275	WP_035245137.1	malic enzyme-like NAD(P)-binding protein	-
ACMG4M_RS15050 (ACMG4M_15050)	rpmE	3241835..3242053 (-)	219	WP_035245139.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 355 a.a.
• Molecular weight: 38399.65 Da
• Isoelectric Point: 4.2720

>NTDB_id=1093943 ACMG4M_RS15035 WP_414430317.1 3236437..3237504(-) (pilM) [Alcanivorax sp. IL3]
MLPFLRKKAQTLLGIDISSTAVKLLELSKSGNRYKVESYGVEPLPANAVVEKNISDVEGVGDAIARLVSRARPGVKAAAV
AVSGSAVITKLIEMDASLNEDELESQLKVEADQYIPFPLDEVRMDFQVMGPVEGNDERVEVLVAASRTENVEMRTDALEI
GGLQAKAVDVEAYAMERAFQLVLPGLPNAEELQTVAVFDIGATMTTLNVFHQGRSVYTREQLFGGKQLTEEIQRRYGISM
EEAGLAKKTGELPDDYEAEVLQPFKDAVVQQVNRSLQFFYGSTQFNEVDYILLAGGSASIQDLAELIQEKVGANCSVANP
FSDMALANKVGASAIANDAPALMIACGLALRSFDQ

Nucleotide

• Length: 1068 bp

>NTDB_id=1093943 ACMG4M_RS15035 WP_414430317.1 3236437..3237504(-) (pilM) [Alcanivorax sp. IL3]
GTGCTGCCTTTCCTCAGAAAAAAGGCCCAGACACTACTGGGGATCGACATAAGCTCCACGGCGGTGAAGCTGCTCGAGCT
GTCGAAATCGGGGAACCGCTACAAGGTCGAAAGCTATGGGGTTGAGCCCCTGCCGGCCAACGCGGTTGTCGAAAAAAACA
TCAGTGACGTGGAGGGCGTCGGGGATGCTATCGCCCGTCTGGTGAGCCGCGCCCGTCCCGGGGTCAAAGCCGCGGCGGTG
GCGGTGTCCGGCTCTGCCGTGATCACCAAGCTGATTGAAATGGACGCCTCTCTCAACGAAGACGAGCTGGAAAGCCAGCT
GAAAGTGGAGGCGGATCAGTACATCCCTTTCCCGCTGGATGAAGTGCGTATGGACTTCCAGGTCATGGGGCCTGTTGAAG
GTAATGACGAGCGCGTGGAAGTGCTTGTGGCAGCGTCTCGCACCGAAAACGTGGAAATGCGGACCGACGCTCTGGAGATT
GGTGGCTTGCAGGCCAAGGCGGTGGATGTGGAAGCCTATGCCATGGAGCGGGCTTTCCAGCTTGTGCTGCCGGGTCTGCC
CAACGCTGAGGAGCTGCAGACCGTGGCGGTCTTTGATATCGGTGCCACCATGACCACGTTGAACGTCTTTCATCAGGGTC
GCAGCGTCTATACTCGTGAGCAGTTGTTTGGTGGTAAGCAGCTGACCGAAGAAATTCAGCGGCGTTATGGTATTTCCATG
GAGGAGGCTGGCCTGGCCAAGAAAACCGGTGAATTGCCCGATGATTATGAGGCGGAAGTCCTTCAGCCCTTCAAAGATGC
TGTCGTTCAGCAAGTCAATCGCTCCTTGCAATTTTTCTACGGCTCCACCCAGTTCAATGAGGTGGACTATATCCTGTTGG
CCGGCGGGTCGGCTTCTATCCAGGATCTGGCAGAGCTAATCCAGGAGAAGGTTGGTGCCAACTGTTCCGTGGCCAACCCG
TTCAGTGATATGGCACTGGCAAACAAAGTGGGAGCCTCTGCCATTGCCAATGATGCGCCAGCACTGATGATCGCCTGCGG
CCTGGCATTGAGGAGCTTTGACCAATGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	56.497	99.718	0.563
comM	Acinetobacter nosocomialis M2	56.497	99.718	0.563
comM	Acinetobacter baylyi ADP1	54.085	100	0.541
pilM	Legionella pneumophila strain ERS1305867	46.61	99.718	0.465