Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   ABFT42_RS15970 Genome accession   NZ_CP178596
Coordinates   3060193..3062493 (-) Length   766 a.a.
NCBI ID   WP_268471514.1    Uniprot ID   -
Organism   Bacillus mojavensis strain C3     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3055193..3067493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ABFT42_RS15930 (ABFT42_15930) - 3055661..3056092 (+) 432 WP_024122673.1 Na(+)/H(+) antiporter subunit B -
  ABFT42_RS15935 (ABFT42_15935) - 3056092..3056433 (+) 342 WP_010331684.1 Na(+)/H(+) antiporter subunit C -
  ABFT42_RS15940 (ABFT42_15940) - 3056426..3057907 (+) 1482 WP_268447274.1 Na+/H+ antiporter subunit D -
  ABFT42_RS15945 (ABFT42_15945) - 3057913..3058389 (+) 477 WP_413286515.1 Na+/H+ antiporter subunit E -
  ABFT42_RS15950 (ABFT42_15950) - 3058389..3058673 (+) 285 WP_326203655.1 Na(+)/H(+) antiporter subunit F1 -
  ABFT42_RS15955 (ABFT42_15955) mnhG 3058657..3059031 (+) 375 WP_010331688.1 monovalent cation/H(+) antiporter subunit G -
  ABFT42_RS15960 (ABFT42_15960) - 3059070..3059450 (-) 381 WP_106022011.1 hotdog fold thioesterase -
  ABFT42_RS15965 (ABFT42_15965) comA 3059468..3060112 (-) 645 WP_010331690.1 two-component system response regulator ComA Regulator
  ABFT42_RS15970 (ABFT42_15970) comP 3060193..3062493 (-) 2301 WP_268471514.1 histidine kinase Regulator
  ABFT42_RS15975 (ABFT42_15975) comX 3062505..3062669 (-) 165 WP_268471515.1 competence pheromone ComX -
  ABFT42_RS15980 (ABFT42_15980) - 3062682..3063542 (-) 861 WP_268471516.1 polyprenyl synthetase family protein -
  ABFT42_RS15985 (ABFT42_15985) degQ 3063727..3063867 (-) 141 WP_010331694.1 degradation enzyme regulation protein DegQ Regulator
  ABFT42_RS15990 (ABFT42_15990) - 3064328..3064696 (+) 369 WP_010331695.1 hypothetical protein -
  ABFT42_RS15995 (ABFT42_15995) - 3064672..3065901 (-) 1230 WP_010331696.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 766 a.a.        Molecular weight: 88474.64 Da        Isoelectric Point: 8.2238

>NTDB_id=1090337 ABFT42_RS15970 WP_268471514.1 3060193..3062493(-) (comP) [Bacillus mojavensis strain C3]
MRAWYNKVSIFLILVSLVYVTYLTYISSSKLLVGAAVAKNHDNEVVVTDIEEFSTAYYSGLQKGDVIKSINNHKVKRPLE
VQKYNSNHVTSIVVERDGEKVKVKPDLMNDGNFSTFIIPLIFYIACLFCCFFVLKINESKKLFSALILIIFLLSASLAYL
SAGGSAKGDLLSRCIMVFTLTSVMLNYLLFLYQYFKELGTVLFNKKVFILYSIPFLNLVFELFRTQLFFRHYVPKINLLS
FFISFIIVSVYFGSILIKSKDTEQAHIIKVLTIINILSFSPFLFLYIIPYVFLGTDGISSFLAASFMFLIPFSLVYQFMT
NKIYNVDFILSRLKYYGILALTPTIILVTVFELMGSPAGDYYYFRLAILMYIIMVAVFYYKEVLDFRFRLKRVSEKFNYQ
DSIYKFTQLIRDSISLNQVFEELKNTILEVSLVSRAHVYEVSADGSIKLYNGEPVNSFEKVYQKEFRKVTPEIGKIVEFN
KGFVMKIGERGGKSFVILCLSKMNTPRLTLEELSWLKTLAFYTNVSIENVMKIEELMSHLEEIKQQESNPVWLKKLMYTI
EEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKDNNPCQEEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYDLGL
VKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATEVLIMLISIQNKIVLHYEDDGVGF
DQEKTNEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEMEL

Nucleotide


Download         Length: 2301 bp        

>NTDB_id=1090337 ABFT42_RS15970 WP_268471514.1 3060193..3062493(-) (comP) [Bacillus mojavensis strain C3]
ATGAGGGCATGGTACAACAAAGTTTCAATTTTTTTAATTTTAGTAAGTTTAGTCTATGTAACTTATTTAACGTATATAAG
TTCGAGTAAACTTTTAGTTGGTGCAGCAGTAGCCAAAAACCATGACAATGAAGTCGTGGTAACAGACATTGAGGAATTCT
CTACGGCTTACTATTCTGGATTACAAAAAGGGGACGTTATTAAAAGTATTAATAATCATAAAGTTAAACGTCCTCTTGAA
GTTCAGAAATATAATTCAAACCATGTGACTTCAATTGTTGTCGAGAGGGATGGAGAAAAGGTTAAAGTTAAGCCTGATTT
AATGAATGATGGGAATTTTTCTACTTTTATAATCCCACTAATATTTTATATAGCTTGTCTATTTTGTTGTTTCTTCGTCC
TGAAAATAAATGAATCGAAAAAACTATTCTCTGCTTTAATTTTAATCATTTTTTTGTTATCTGCTTCCTTAGCATATTTA
AGTGCGGGTGGATCCGCAAAGGGGGATTTGTTAAGCAGATGTATAATGGTATTCACTTTAACATCTGTAATGTTAAACTA
TCTTCTTTTCTTATATCAATATTTTAAAGAGCTAGGTACTGTGTTATTTAACAAAAAAGTTTTTATATTATATTCAATTC
CATTTTTAAATCTAGTTTTTGAATTGTTTCGTACTCAACTTTTCTTTAGGCATTATGTGCCTAAAATAAATTTACTATCG
TTCTTTATTTCATTTATAATCGTGAGCGTTTATTTTGGATCTATTTTAATTAAAAGTAAGGATACTGAGCAAGCGCATAT
TATAAAAGTTCTTACCATAATTAATATTTTATCTTTTTCGCCGTTCTTGTTTTTATATATAATACCTTATGTATTCTTAG
GCACAGATGGCATTTCTTCTTTTCTGGCTGCTTCATTTATGTTCCTAATACCATTTTCTTTGGTTTATCAATTTATGACA
AATAAAATTTATAATGTGGATTTTATTTTAAGCAGGTTAAAATATTATGGAATATTAGCATTAACGCCTACAATTATTTT
AGTTACTGTATTTGAGTTAATGGGAAGTCCAGCTGGAGATTATTATTATTTCAGACTTGCGATTCTGATGTATATTATTA
TGGTGGCAGTGTTTTATTATAAAGAAGTACTTGATTTCAGATTTAGATTAAAGAGAGTCTCGGAAAAATTTAATTACCAA
GACAGTATATATAAATTTACGCAGCTCATTAGAGACTCAATATCTTTGAATCAAGTATTTGAAGAACTGAAAAATACTAT
ACTTGAGGTCTCCCTTGTTAGCCGAGCACATGTATATGAAGTTTCAGCTGACGGAAGTATTAAACTGTACAATGGTGAGC
CCGTAAATTCATTTGAAAAAGTCTATCAAAAAGAATTTAGAAAAGTCACACCCGAAATAGGGAAAATCGTTGAATTTAAT
AAAGGCTTTGTCATGAAGATTGGTGAACGCGGTGGAAAATCATTTGTGATTCTTTGTTTATCTAAAATGAATACGCCCCG
TCTCACACTTGAAGAACTTTCTTGGCTGAAAACCTTGGCGTTTTATACAAACGTATCGATTGAGAACGTCATGAAAATCG
AAGAGTTGATGAGTCATTTAGAAGAAATAAAACAACAGGAATCCAACCCGGTATGGCTCAAAAAACTCATGTACACCATC
GAAGAAAAACAACGCTCTGATCTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCATTAAAGCGCCAGTG
TGAGCTGTTTTTGGCTGATTTTAAGAAGGATAATAATCCGTGTCAGGAAGAGGTGCAGGACAAGCTTGTACAGATGAATG
AGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAATTGCGGCCGCAGCTTTTGTATGATTTGGGACTG
GTGAAGGCGTTGTCCAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATTCGCTTAAATACCGGCAGATTTAC
GGCGTCGCTTGATTTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTTTATCGAATGCAGTGAAACACTCTC
AGGCGACGGAAGTGCTTATTATGCTGATCAGCATTCAAAACAAAATTGTTCTCCATTATGAGGACGATGGTGTGGGATTT
GATCAAGAGAAAACCAACGAACATTCCATGAGTATGGGTCTTTCTGGCATTAAGGAGCGAGTCAGGGCTTTAGATGGACG
CCTCCGAATCGAAACAAGTGAAGGAAAGGGCTTTAAGGCCGATATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

57.326

100

0.582


Multiple sequence alignment