Detailed information NTG0108961

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: ACAM23_RS04920
• Genome accession: NZ_AP031394
• Coordinates: 939811..940764 (+)
• Length: 317 a.a.
• NCBI ID: WP_000495894.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 16P28
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 934811..945764

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACAM23_RS04895	rpmG	935554..935703 (+)	150	WP_001810029.1	50S ribosomal protein L33	-
ACAM23_RS04900 (SPNE16P28_09600)	secG	935743..935976 (+)	234	WP_000282517.1	preprotein translocase subunit SecG	-
ACAM23_RS04905 (SPNE16P28_09610)	rnr	936078..938432 (+)	2355	WP_000654883.1	ribonuclease R	-
ACAM23_RS04910 (SPNE16P28_09620)	smpB	938395..938862 (+)	468	WP_001051750.1	SsrA-binding protein SmpB	-
ACAM23_RS04915 (SPNE16P28_09630)	tehB	938878..939738 (+)	861	WP_000413762.1	SAM-dependent methyltransferase TehB	-
ACAM23_RS04920 (SPNE16P28_09640)	coiA	939811..940764 (+)	954	WP_000495894.1	competence protein CoiA	Machinery gene
ACAM23_RS04925 (SPNE16P28_09650)	pepF	940783..942585 (+)	1803	WP_000244131.1	oligoendopeptidase F	Regulator
ACAM23_RS04930 (SPNE16P28_09660)	-	942587..943300 (+)	714	WP_001812425.1	O-methyltransferase	-
ACAM23_RS04935 (SPNE16P28_09670)	prsA	943367..944308 (+)	942	WP_000727952.1	peptidylprolyl isomerase PrsA	-
ACAM23_RS04940 (SPNE16P28_09680)	-	944427..944756 (-)	330	Protein_975	transposase	-
ACAM23_RS04945	-	945179..945283 (+)	105	Protein_976	IS630 family transposase	-

Sequence

Protein

• Length: 317 a.a.
• Molecular weight: 38248.93 Da
• Isoelectric Point: 9.2255

>NTDB_id=108961 ACAM23_RS04920 WP_000495894.1 939811..940764(+) (coiA) [Streptococcus pneumoniae strain 16P28]
MFVARDARGELVNVLEDKLEKQAYTCPACGGQIHLRQGPSVRTHFAHKSLKDCDFFFENESPEHIANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGKKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYRNFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Nucleotide

• Length: 954 bp

>NTDB_id=108961 ACAM23_RS04920 WP_000495894.1 939811..940764(+) (coiA) [Streptococcus pneumoniae strain 16P28]
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGATCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCCTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACATAGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTAAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCGGAACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAG

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (13-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus pneumoniae TIGR4	98.423	100	0.984
coiA	Streptococcus pneumoniae Rx1	97.792	100	0.978
coiA	Streptococcus pneumoniae D39	97.792	100	0.978
coiA	Streptococcus pneumoniae R6	97.792	100	0.978
coiA	Streptococcus mitis NCTC 12261	88.959	100	0.89
coiA	Lactococcus lactis subsp. cremoris KW2	42.593	100	0.435