Detailed information NTG1089303

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: ACLSIV_RS08145
• Genome accession: NZ_CP178385
• Coordinates: 1650171..1651160 (-)
• Length: 329 a.a.
• NCBI ID: WP_172506571.1
• Uniprot ID: -
• Organism: Lactococcus raffinolactis strain GCULR
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1645171..1656160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLSIV_RS08130 (ACLSIV_08130)	pepF	1645768..1647564 (-)	1797	WP_096039405.1	oligoendopeptidase F	Regulator
ACLSIV_RS08135 (ACLSIV_08135)	mmuM	1647713..1648630 (-)	918	WP_096039406.1	homocysteine S-methyltransferase	-
ACLSIV_RS08140 (ACLSIV_08140)	-	1648608..1649999 (-)	1392	WP_412921268.1	amino acid permease	-
ACLSIV_RS08145 (ACLSIV_08145)	coiA	1650171..1651160 (-)	990	WP_172506571.1	competence protein CoiA	Machinery gene
ACLSIV_RS08150 (ACLSIV_08150)	-	1651237..1652202 (-)	966	WP_061775228.1	Gfo/Idh/MocA family protein	-
ACLSIV_RS08155 (ACLSIV_08155)	-	1652450..1652905 (-)	456	WP_412921270.1	hypothetical protein	-
ACLSIV_RS08160 (ACLSIV_08160)	-	1654114..1654476 (-)	363	WP_412921272.1	hypothetical protein	-
ACLSIV_RS08165 (ACLSIV_08165)	-	1654489..1655064 (-)	576	WP_412921274.1	hypothetical protein	-
ACLSIV_RS08170 (ACLSIV_08170)	-	1655181..1655384 (-)	204	WP_412921276.1	hypothetical protein	-
ACLSIV_RS08175 (ACLSIV_08175)	-	1655398..1655694 (-)	297	WP_412921278.1	hypothetical protein	-

Sequence

Protein

• Length: 329 a.a.
• Molecular weight: 38700.31 Da
• Isoelectric Point: 7.1423

>NTDB_id=1089303 ACLSIV_RS08145 WP_172506571.1 1650171..1651160(-) (coiA) [Lactococcus raffinolactis strain GCULR]
MLVAVNEAEQIINLLEFSKSDLTELVGQFLRCPACKSQVRLKNGHVKMPHFAHVNLAACQYYSENESLQHLTLKKRLYHW
FKQTEQVKIEHFLPELQQTPDLLVNETIAIEIQCSHLSIQRLRERTETYRAHGYTVLWLMGKDLWLGQHLTQLKQQLLYL
TQNAGFYYWELDLQREKIRLNYLCHEDLIGRLHYLQREFSFDVGNLLEVLRTPFAASSAKLTDQLSQDNPAFIRSQLYYQ
NPKWLKIQEKYYQNGQNLMTFKNFPIKLYPIGLNLLTHQFEGVVEPAFCQITIDISRYYHHFLAYPQDDGVYPPGFYARA
ETGDGDCKS

Nucleotide

• Length: 990 bp

>NTDB_id=1089303 ACLSIV_RS08145 WP_172506571.1 1650171..1651160(-) (coiA) [Lactococcus raffinolactis strain GCULR]
ATGCTAGTTGCAGTGAATGAAGCAGAACAAATCATCAATTTACTAGAATTTAGCAAGTCGGACCTTACTGAATTGGTAGG
TCAATTTTTGCGTTGTCCTGCTTGCAAAAGTCAGGTACGCTTGAAAAATGGTCATGTAAAAATGCCCCATTTTGCTCACG
TAAATTTAGCAGCCTGTCAATATTATTCGGAGAACGAAAGCCTGCAGCACTTAACCTTAAAAAAACGTTTATATCACTGG
TTCAAGCAAACAGAGCAGGTCAAAATCGAGCATTTTTTACCTGAGTTACAGCAGACGCCTGACTTACTGGTTAATGAAAC
GATTGCGATTGAAATTCAATGCAGTCACCTGTCTATTCAGAGACTGCGTGAGCGGACAGAAACCTATCGAGCTCATGGCT
ACACCGTCCTCTGGCTCATGGGAAAGGATTTATGGTTGGGTCAGCATTTGACGCAACTCAAGCAACAGTTACTCTATTTA
ACCCAGAATGCTGGTTTTTACTATTGGGAGTTGGATTTGCAGCGTGAAAAAATCCGCCTCAACTATCTGTGCCATGAAGA
TTTAATAGGGCGTTTGCATTATTTACAGCGTGAATTTTCCTTCGATGTAGGGAATTTACTTGAGGTGCTTCGAACGCCAT
TTGCGGCAAGCTCAGCCAAATTGACTGACCAGTTATCGCAAGATAATCCAGCATTTATCAGGTCTCAGCTTTATTATCAG
AATCCCAAATGGTTGAAAATTCAAGAAAAGTATTATCAGAATGGGCAAAATTTGATGACGTTCAAAAACTTCCCTATTAA
GTTATATCCGATTGGCTTGAATCTCTTAACGCACCAGTTCGAAGGCGTTGTCGAGCCTGCCTTTTGTCAAATTACAATCG
ATATCAGTCGCTATTATCACCATTTTCTGGCTTATCCGCAGGATGATGGGGTTTATCCGCCGGGATTTTATGCTAGGGCT
GAGACAGGTGATGGAGATTGTAAAAGCTGA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	52.174	97.872	0.511
coiA	Streptococcus mitis NCTC 12261	44.444	98.48	0.438
coiA	Streptococcus pneumoniae TIGR4	42.593	98.48	0.419
coiA	Streptococcus pneumoniae Rx1	42.593	98.48	0.419
coiA	Streptococcus pneumoniae D39	42.593	98.48	0.419
coiA	Streptococcus pneumoniae R6	42.593	98.48	0.419