Detailed information NTG1089158

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: ACLNGX_RS11985
• Genome accession: NZ_CP178374
• Coordinates: 2536754..2537191 (-)
• Length: 145 a.a.
• NCBI ID: WP_025852922.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain 2023
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2531754..2542191

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLNGX_RS11935 (ACLNGX_11935)	sinI	2532139..2532312 (+)	174	WP_003153105.1	anti-repressor SinI	Regulator
ACLNGX_RS11940 (ACLNGX_11940)	sinR	2532346..2532681 (+)	336	WP_003153104.1	transcriptional regulator SinR	Regulator
ACLNGX_RS11945 (ACLNGX_11945)	tasA	2532729..2533514 (-)	786	WP_007408329.1	biofilm matrix protein TasA	-
ACLNGX_RS11950 (ACLNGX_11950)	sipW	2533578..2534162 (-)	585	WP_060562614.1	signal peptidase I SipW	-
ACLNGX_RS11955 (ACLNGX_11955)	tapA	2534134..2534805 (-)	672	WP_071391613.1	amyloid fiber anchoring/assembly protein TapA	-
ACLNGX_RS11960 (ACLNGX_11960)	-	2535064..2535393 (+)	330	WP_071391612.1	DUF3889 domain-containing protein	-
ACLNGX_RS11965 (ACLNGX_11965)	-	2535433..2535612 (-)	180	WP_003153093.1	YqzE family protein	-
ACLNGX_RS11970 (ACLNGX_11970)	comGG	2535669..2536046 (-)	378	WP_071391611.1	competence type IV pilus minor pilin ComGG	Machinery gene
ACLNGX_RS11975 (ACLNGX_11975)	comGF	2536047..2536442 (-)	396	WP_071391610.1	competence type IV pilus minor pilin ComGF	-
ACLNGX_RS11980 (ACLNGX_11980)	comGE	2536456..2536770 (-)	315	WP_015388003.1	competence type IV pilus minor pilin ComGE	Machinery gene
ACLNGX_RS11985 (ACLNGX_11985)	comGD	2536754..2537191 (-)	438	WP_025852922.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACLNGX_RS11990 (ACLNGX_11990)	comGC	2537181..2537489 (-)	309	WP_003153087.1	competence type IV pilus major pilin ComGC	Machinery gene
ACLNGX_RS11995 (ACLNGX_11995)	comGB	2537494..2538531 (-)	1038	WP_063174751.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACLNGX_RS12000 (ACLNGX_12000)	comGA	2538518..2539588 (-)	1071	WP_003153083.1	competence type IV pilus ATPase ComGA	Machinery gene
ACLNGX_RS12005 (ACLNGX_12005)	-	2539780..2540730 (-)	951	WP_071391609.1	magnesium transporter CorA family protein	-
ACLNGX_RS12010 (ACLNGX_12010)	-	2540877..2542178 (+)	1302	WP_166706141.1	hemolysin family protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16268.78 Da
• Isoelectric Point: 10.1850

>NTDB_id=1089158 ACLNGX_RS11985 WP_025852922.1 2536754..2537191(-) (comGD) [Bacillus velezensis strain 2023]
MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPVCTHLAVRQKTEQLQKDIQLAQETAIAEHKRTKITFLPKEHKYK
LQSAGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKIQLKSAGFTYEITVYLGSGNVHAKRK

Nucleotide

• Length: 438 bp

>NTDB_id=1089158 ACLNGX_RS11985 WP_025852922.1 2536754..2537191(-) (comGD) [Bacillus velezensis strain 2023]
TTGAACAATAACAGGCGGACAGAAAACGGGTTTACCCTTCTTGAAAGCCTGATTGTGTTAAGCCTGGCGTCCGTCCTGCT
GACGGTTTTGTTCACGACGGTTCCGCCGGTCTGCACCCACCTTGCCGTGCGGCAAAAAACAGAACAGCTTCAAAAAGATA
TTCAGCTTGCGCAGGAAACGGCTATCGCAGAACATAAAAGAACAAAAATCACTTTTCTTCCAAAAGAGCATAAATACAAA
CTGCAGTCAGCCGGAAGGATTGTCGAGCGTTCTTTTGATTCGCTTCACATTACACTTGTAACTTTACCGGAGAGCCTTGA
ATTTAACGAAAAAGGCCATCCGAATTCGGGAGGAAAGATTCAATTGAAGAGCGCCGGGTTCACCTATGAGATCACAGTTT
ACTTAGGGAGCGGAAATGTCCATGCTAAACGGAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-31)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Bacillus subtilis subsp. subtilis str. 168	54.795	100	0.552