Detailed information NTG1089068

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACKWDP_RS17870
• Genome accession: NZ_CP178354
• Coordinates: 3672078..3673136 (-)
• Length: 352 a.a.
• NCBI ID: WP_005115308.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain A297
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3667078..3678136

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKWDP_RS17845 (ACKWDP_17845)	aroK	3667353..3667922 (-)	570	WP_000643712.1	shikimate kinase AroK	-
ACKWDP_RS17850 (ACKWDP_17850)	pilQ	3667934..3670099 (-)	2166	WP_001017040.1	type IV pilus secretin PilQ family protein	Machinery gene
ACKWDP_RS17855 (ACKWDP_17855)	pilP	3670162..3670689 (-)	528	WP_000695059.1	pilus assembly protein PilP	Machinery gene
ACKWDP_RS17860 (ACKWDP_17860)	pilO	3670700..3671440 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACKWDP_RS17865 (ACKWDP_17865)	pilN	3671437..3672078 (-)	642	WP_000201229.1	PilN domain-containing protein	Machinery gene
ACKWDP_RS17870 (ACKWDP_17870)	pilM	3672078..3673136 (-)	1059	WP_005115308.1	pilus assembly protein PilM	Machinery gene
ACKWDP_RS17875 (ACKWDP_17875)	ponA	3673298..3675853 (+)	2556	WP_000736662.1	penicillin-binding protein PBP1a	-
ACKWDP_RS17880 (ACKWDP_17880)	-	3675871..3676695 (-)	825	WP_001990541.1	putative RNA methyltransferase	-
ACKWDP_RS17885 (ACKWDP_17885)	-	3676698..3677030 (-)	333	WP_000169598.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39092.69 Da
• Isoelectric Point: 4.4618

>NTDB_id=1089068 ACKWDP_RS17870 WP_005115308.1 3672078..3673136(-) (pilM) [Acinetobacter baumannii strain A297]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFFSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1089068 ACKWDP_RS17870 WP_005115308.1 3672078..3673136(-) (pilM) [Acinetobacter baumannii strain A297]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTTTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	99.716	100	0.997
comM	Acinetobacter nosocomialis M2	98.864	100	0.989
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42