Detailed information NTG1088706

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACLUR6_RS13620
• Genome accession: NZ_CP178250
• Coordinates: 2907896..2909014 (+)
• Length: 372 a.a.
• NCBI ID: WP_000347034.1
• Uniprot ID: A0A009HMD8
• Organism: Acinetobacter baumannii strain ACI
• Function: mediate the depolymerization of the type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2902896..2914014

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACLUR6_RS13610 (ACLUR6_13610)	-	2906012..2906704 (-)	693	WP_168726751.1	YggS family pyridoxal phosphate-dependent enzyme	-
ACLUR6_RS13615 (ACLUR6_13615)	pilT	2906831..2907868 (+)	1038	WP_000355489.1	type IV pilus twitching motility protein PilT	Machinery gene
ACLUR6_RS13620 (ACLUR6_13620)	pilU	2907896..2909014 (+)	1119	WP_000347034.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACLUR6_RS13625 (ACLUR6_13625)	fur	2909084..2909521 (-)	438	WP_001122847.1	ferric iron uptake transcriptional regulator	-
ACLUR6_RS13630 (ACLUR6_13630)	-	2909633..2910031 (+)	399	WP_001170994.1	outer membrane protein assembly factor BamE	-
ACLUR6_RS13635 (ACLUR6_13635)	-	2910086..2910409 (-)	324	WP_045901052.1	RnfH family protein	-
ACLUR6_RS13640 (ACLUR6_13640)	-	2910409..2911476 (-)	1068	WP_168726750.1	hypothetical protein	-
ACLUR6_RS13645 (ACLUR6_13645)	-	2911629..2912084 (-)	456	WP_000782976.1	bacteriohemerythrin	-
ACLUR6_RS13650 (ACLUR6_13650)	-	2912337..2913185 (-)	849	WP_000336548.1	class II glutamine amidotransferase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 41891.09 Da
• Isoelectric Point: 6.6943

>NTDB_id=1088706 ACLUR6_RS13620 WP_000347034.1 2907896..2909014(+) (pilU) [Acinetobacter baumannii strain ACI]
MDFNDLLNLMVEKKSSDLFITDGVAPSMKINGQIVPISKNSLSGEVIGQLLHSIMSEKQRKEFADTRECNFAIMNREKTA
RFRVSAFQQRDMPGMVLRRIETKIPSIDDLQLPPVLKDLSMTKRGIIIFVGATGTGKSTSLASMISHRNHNSKGHIITIE
DPIEFIHEHAGCIITQREVGIDTDSFEIALKNTLRQAPDVILIGEIRSREVMDYAIGFAETGHLVLATMHANNANQALDR
IIHFFESDRHSQLYMDLSLNLKAMIAQQLIPTPDGNSRRAAIEILINSPLISDYIRKGEIHEIKDLMKRSRELGMQTFDQ
ALFDLYKAGQITYKDALKHADSPNDLRLTIKLADEGPDQLSDGKQHLTFDRQ

Nucleotide

• Length: 1119 bp

>NTDB_id=1088706 ACLUR6_RS13620 WP_000347034.1 2907896..2909014(+) (pilU) [Acinetobacter baumannii strain ACI]
ATGGATTTTAATGACCTACTCAACCTGATGGTTGAAAAAAAATCTTCCGATCTCTTTATTACAGATGGCGTTGCGCCCTC
TATGAAGATTAACGGGCAAATTGTTCCAATTTCAAAAAATAGCCTTTCTGGGGAAGTAATTGGTCAACTGTTACATTCCA
TTATGAGTGAAAAACAACGCAAAGAATTTGCAGACACTCGTGAATGTAACTTTGCCATTATGAACCGTGAAAAAACGGCG
CGTTTTCGTGTCAGTGCTTTTCAGCAGCGCGACATGCCGGGCATGGTACTACGTCGTATTGAAACCAAGATTCCTTCAAT
TGATGACTTGCAGTTACCACCTGTACTTAAAGATTTATCGATGACCAAACGTGGCATTATTATTTTCGTAGGTGCGACAG
GTACAGGTAAATCCACTTCATTGGCTTCAATGATCAGCCATCGTAACCATAACTCTAAGGGCCATATCATTACCATTGAA
GACCCGATTGAGTTTATTCACGAACATGCAGGTTGCATCATTACTCAGCGTGAAGTCGGGATCGATACCGACTCATTTGA
AATTGCCTTGAAAAATACACTACGACAAGCGCCGGATGTGATCTTAATTGGTGAGATCCGTTCTCGTGAAGTCATGGACT
ACGCGATTGGCTTTGCTGAAACAGGCCATCTTGTATTAGCTACCATGCACGCTAACAATGCCAACCAAGCGCTCGACCGT
ATTATTCACTTTTTTGAAAGTGATCGTCACAGTCAGCTTTACATGGACTTGTCACTTAACTTAAAGGCAATGATTGCGCA
GCAGCTCATTCCAACACCAGATGGTAATTCACGCCGTGCAGCAATTGAGATTTTAATTAACTCACCATTAATTTCAGACT
ACATCCGTAAAGGTGAAATTCATGAAATTAAAGATTTGATGAAACGCTCACGTGAACTTGGTATGCAGACCTTTGACCAA
GCTTTATTTGATTTATATAAAGCTGGTCAAATTACCTACAAAGATGCACTTAAACATGCTGACTCACCGAACGATTTACG
TTTAACCATTAAACTTGCAGATGAAGGTCCTGATCAATTATCAGACGGGAAACAGCATTTAACTTTTGACCGCCAGTAA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (34-270)

3D structure

• AlphaFold DB: A0A009HMD8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Acinetobacter baylyi ADP1	75.661	100	0.769
pilU	Pseudomonas stutzeri DSM 10701	69.022	98.925	0.683
pilU	Vibrio cholerae strain A1552	53.243	99.462	0.53
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	41.908	93.011	0.39