Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | ABWW24_RS03400 | Genome accession | NZ_AP031330 |
| Coordinates | 589640..590263 (-) | Length | 207 a.a. |
| NCBI ID | WP_011173433.1 | Uniprot ID | Q72IW7 |
| Organism | Thermus thermophilus strain TF25 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 584640..595263
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABWW24_RS03380 (TthTF25_06590) | aroC | 584705..585856 (-) | 1152 | WP_353300692.1 | chorismate synthase | - |
| ABWW24_RS03385 (TthTF25_06600) | pilQ | 585915..588188 (-) | 2274 | WP_353300693.1 | secretin N-terminal domain-containing protein | Machinery gene |
| ABWW24_RS03390 (TthTF25_06610) | pilW | 588185..589072 (-) | 888 | WP_353300694.1 | competence protein | Machinery gene |
| ABWW24_RS03395 (TthTF25_06620) | pilO | 589069..589650 (-) | 582 | WP_143586070.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ABWW24_RS03400 (TthTF25_06630) | pilN | 589640..590263 (-) | 624 | WP_011173433.1 | competence protein | Machinery gene |
| ABWW24_RS03405 (TthTF25_06640) | pilM | 590256..591389 (-) | 1134 | WP_353300695.1 | type IV pilus assembly protein PilM | Machinery gene |
| ABWW24_RS03410 (TthTF25_06650) | - | 591526..592530 (-) | 1005 | WP_244340638.1 | homoisocitrate dehydrogenase | - |
| ABWW24_RS03415 (TthTF25_06660) | - | 592585..593076 (-) | 492 | WP_011173430.1 | DUF5317 domain-containing protein | - |
| ABWW24_RS03420 (TthTF25_06670) | - | 593127..594533 (-) | 1407 | WP_353300696.1 | HD-GYP domain-containing protein | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 23035.51 Da Isoelectric Point: 9.7530
>NTDB_id=108755 ABWW24_RS03400 WP_011173433.1 589640..590263(-) (pilN) [Thermus thermophilus strain TF25]
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEVEALRPFIAELGRLQEERKAL
EALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALRSVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSRE
ALVRFIRAFETSPRFGIEFQGASLDEGRGLYTFSARVGATGGESGAR
MIRLNLLPKNLRRRVEPGWWRLLALLFALVVLGVLGLVHYTAYTELSLAKAERDQLQAEVEALRPFIAELGRLQEERKAL
EALLAIREGLEKNAVPWSQYLAAFINQIPRAGGRLEVALRSVSARALSEEEAARLAQEGTYDGKRIRVEFALQGEALSRE
ALVRFIRAFETSPRFGIEFQGASLDEGRGLYTFSARVGATGGESGAR
Nucleotide
Download Length: 624 bp
>NTDB_id=108755 ABWW24_RS03400 WP_011173433.1 589640..590263(-) (pilN) [Thermus thermophilus strain TF25]
TTGATTAGGCTGAACCTTCTCCCCAAGAACCTCCGGCGCCGGGTGGAGCCGGGCTGGTGGCGCCTCCTCGCCCTCCTCTT
CGCCCTCGTGGTCCTCGGGGTCTTGGGGCTCGTCCACTACACCGCCTACACCGAGCTCTCCCTGGCCAAGGCGGAGCGGG
ACCAGCTCCAGGCGGAGGTGGAGGCTTTGAGGCCCTTCATCGCCGAGCTCGGCCGCCTGCAGGAGGAGCGCAAGGCCCTC
GAGGCCCTCCTCGCCATCCGGGAAGGCCTGGAGAAAAACGCCGTGCCCTGGTCCCAGTACCTGGCCGCCTTCATCAACCA
GATCCCCAGGGCGGGGGGGCGCCTCGAGGTGGCCCTCCGCTCGGTGAGCGCCCGCGCCCTCTCGGAAGAGGAGGCCGCTC
GCCTGGCCCAGGAGGGCACCTACGACGGCAAGCGGATCCGGGTGGAGTTCGCCCTCCAGGGGGAGGCCCTGAGCCGGGAG
GCCCTGGTCCGGTTCATCCGGGCCTTTGAGACCTCCCCCCGATTCGGCATTGAGTTCCAGGGGGCCTCCCTGGACGAGGG
CCGGGGGCTTTACACCTTCAGCGCCCGCGTGGGCGCGACGGGGGGTGAAAGCGGTGCTCGCTAG
TTGATTAGGCTGAACCTTCTCCCCAAGAACCTCCGGCGCCGGGTGGAGCCGGGCTGGTGGCGCCTCCTCGCCCTCCTCTT
CGCCCTCGTGGTCCTCGGGGTCTTGGGGCTCGTCCACTACACCGCCTACACCGAGCTCTCCCTGGCCAAGGCGGAGCGGG
ACCAGCTCCAGGCGGAGGTGGAGGCTTTGAGGCCCTTCATCGCCGAGCTCGGCCGCCTGCAGGAGGAGCGCAAGGCCCTC
GAGGCCCTCCTCGCCATCCGGGAAGGCCTGGAGAAAAACGCCGTGCCCTGGTCCCAGTACCTGGCCGCCTTCATCAACCA
GATCCCCAGGGCGGGGGGGCGCCTCGAGGTGGCCCTCCGCTCGGTGAGCGCCCGCGCCCTCTCGGAAGAGGAGGCCGCTC
GCCTGGCCCAGGAGGGCACCTACGACGGCAAGCGGATCCGGGTGGAGTTCGCCCTCCAGGGGGAGGCCCTGAGCCGGGAG
GCCCTGGTCCGGTTCATCCGGGCCTTTGAGACCTCCCCCCGATTCGGCATTGAGTTCCAGGGGGCCTCCCTGGACGAGGG
CCGGGGGCTTTACACCTTCAGCGCCCGCGTGGGCGCGACGGGGGGTGAAAGCGGTGCTCGCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Thermus thermophilus HB27 |
100 |
100 |
1 |