Detailed information NTG0108752

Bioinformatically predicted

Overview

• Name: pilQ
• Type: Machinery gene
• Locus tag: ABWW24_RS03385
• Genome accession: NZ_AP031330
• Coordinates: 585915..588188 (-)
• Length: 757 a.a.
• NCBI ID: WP_353300693.1
• Uniprot ID: -
• Organism: Thermus thermophilus strain TF25
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 580915..593188

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABWW24_RS03355 (TthTF25_06540)	-	580941..581288 (+)	348	WP_353300688.1	DUF4870 domain-containing protein	-
ABWW24_RS03360 (TthTF25_06550)	-	581266..581643 (-)	378	WP_353300689.1	4'-phosphopantetheinyl transferase superfamily protein	-
ABWW24_RS03365 (TthTF25_06560)	rsmF	581686..583056 (+)	1371	WP_353300690.1	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	-
ABWW24_RS03370 (TthTF25_06570)	-	583102..584148 (-)	1047	WP_353300691.1	3-dehydroquinate synthase family protein	-
ABWW24_RS03375 (TthTF25_06580)	-	584126..584680 (-)	555	WP_353300922.1	shikimate kinase	-
ABWW24_RS03380 (TthTF25_06590)	aroC	584705..585856 (-)	1152	WP_353300692.1	chorismate synthase	-
ABWW24_RS03385 (TthTF25_06600)	pilQ	585915..588188 (-)	2274	WP_353300693.1	secretin N-terminal domain-containing protein	Machinery gene
ABWW24_RS03390 (TthTF25_06610)	pilW	588185..589072 (-)	888	WP_353300694.1	competence protein	Machinery gene
ABWW24_RS03395 (TthTF25_06620)	pilO	589069..589650 (-)	582	WP_143586070.1	type 4a pilus biogenesis protein PilO	Machinery gene
ABWW24_RS03400 (TthTF25_06630)	pilN	589640..590263 (-)	624	WP_011173433.1	competence protein	Machinery gene
ABWW24_RS03405 (TthTF25_06640)	pilM	590256..591389 (-)	1134	WP_353300695.1	type IV pilus assembly protein PilM	Machinery gene
ABWW24_RS03410 (TthTF25_06650)	-	591526..592530 (-)	1005	WP_244340638.1	homoisocitrate dehydrogenase	-
ABWW24_RS03415 (TthTF25_06660)	-	592585..593076 (-)	492	WP_011173430.1	DUF5317 domain-containing protein	-

Sequence

Protein

• Length: 757 a.a.
• Molecular weight: 82703.77 Da
• Isoelectric Point: 5.3086

>NTDB_id=108752 ABWW24_RS03385 WP_353300693.1 585915..588188(-) (pilQ) [Thermus thermophilus strain TF25]
MKSAWIRAAVIALAGLGAFGLAGSFPEEPRFQAPVNLKVSESQVKAGQTLPLDVVLEALARSVGLQPLIYRAYDPSGDPA
KAQPPLPNIKLDFQGKPFREVWDLLFATYGNQYSLDYLFLPPDVVVVAPTQVITALVDAPSRTGAMERRPYIVGVPEIAY
KRTETDAQGQPRTVVNIEGAKAWVQNDLLPFLSREAAGLNVNWIVVEEGGRLKAVLSVLATPEQHARFSDILQRAGIDFR
PLPALAQPKPRVEKTYTLTYATFPDLLVFLQSRLPEAQISVVPTNPQRAIVLATEEDHARLSELLKTADVPKTVRRVYAL
QNLTFREAQERLKPLLEKDLKGARLESLPGNPKALLLEAPEAEHALFAEILKALDVPPQAPQAPQEATLRRLYPLRYANA
EQVAPFLAREVPGIVVQTVPGQPVLSVRGTEKQLAEVESLLAQIDRAPEQGPPVFQRAYQLSNAKAVELAQVLQEALKAR
QAQNQGQQNQAPPTREATVVADPRTNTLIVTGTQEDLALVEGLIPKLDQPVPQVSLRVRIQEVQSNLTRSLGLKWNSIAG
GNAAASILDSGLSLIFDSTRSLAALNIMATLDALQQQGLSRALRDVNQTVLNNQTARLQSGETFFIRRVVNDQVERVPFD
VGLIVEVTPQITADGQILLNIKAEVSGNVQRNPVDGDVDRFTKQVVTTTLRVKDGETVVLGGLTSQESNQSQQGVPLLMD
IPLIGELFKQRTNESTDKELLVVITADILKETASANP

Nucleotide

• Length: 2274 bp

>NTDB_id=108752 ABWW24_RS03385 WP_353300693.1 585915..588188(-) (pilQ) [Thermus thermophilus strain TF25]
ATGAAGAGTGCGTGGATCCGTGCGGCCGTGATCGCCCTCGCAGGGCTAGGGGCTTTTGGCCTTGCGGGGAGCTTTCCCGA
GGAGCCCCGCTTCCAGGCCCCGGTGAACCTCAAGGTCTCGGAATCCCAGGTCAAGGCGGGCCAGACCCTGCCCTTGGACG
TGGTCCTCGAGGCCCTGGCAAGGAGCGTGGGGCTCCAGCCCCTCATCTACCGGGCCTACGACCCGAGCGGGGACCCCGCC
AAGGCCCAGCCCCCCCTGCCCAACATCAAGCTGGACTTCCAGGGCAAGCCCTTCCGGGAGGTCTGGGACCTCCTCTTCGC
CACCTACGGCAACCAGTACAGCCTGGACTACCTCTTCCTGCCCCCCGACGTGGTGGTGGTGGCCCCCACCCAGGTGATCA
CCGCCTTGGTGGACGCCCCGAGCCGCACGGGGGCCATGGAGCGCAGGCCCTACATCGTGGGCGTCCCCGAGATCGCCTAT
AAGCGCACGGAGACGGACGCCCAGGGCCAGCCCCGCACGGTCGTCAACATTGAGGGCGCCAAGGCCTGGGTCCAGAACGA
CCTCCTCCCCTTCCTCTCCCGGGAGGCCGCGGGGCTCAACGTGAACTGGATCGTGGTGGAGGAGGGCGGGAGGCTCAAGG
CCGTTCTCTCCGTTCTCGCCACCCCCGAGCAACACGCCCGCTTCTCCGATATCCTGCAACGGGCCGGGATTGACTTCCGC
CCCCTCCCCGCCCTGGCCCAGCCCAAGCCCCGGGTGGAGAAGACCTACACCCTCACCTACGCCACCTTCCCCGACCTCCT
CGTCTTCCTCCAGTCCCGCCTCCCCGAGGCCCAGATCAGCGTGGTTCCCACCAACCCCCAAAGGGCCATCGTCCTCGCCA
CCGAGGAGGACCACGCCCGCTTGAGCGAGCTTCTGAAGACGGCCGACGTCCCCAAGACCGTCCGCCGGGTCTACGCCCTG
CAGAACCTCACCTTCAGGGAGGCCCAGGAGCGCCTAAAGCCCCTCCTGGAGAAGGACCTCAAGGGGGCCCGCCTGGAGAG
CCTCCCCGGCAACCCCAAGGCCCTCCTCCTCGAGGCCCCCGAGGCGGAGCACGCCCTCTTCGCCGAGATCCTGAAGGCCC
TGGACGTCCCCCCCCAGGCCCCCCAAGCCCCCCAGGAGGCCACCTTGCGGCGCCTCTACCCCCTGCGCTACGCCAACGCC
GAGCAGGTGGCCCCCTTCCTCGCCCGGGAGGTGCCGGGGATCGTGGTCCAGACCGTTCCCGGCCAGCCCGTCCTCTCGGT
GCGGGGCACGGAGAAGCAGCTCGCCGAGGTGGAAAGCCTCCTCGCCCAGATTGACCGGGCCCCCGAGCAAGGCCCTCCCG
TGTTCCAGCGGGCCTACCAGCTCTCCAACGCCAAGGCGGTGGAGCTCGCCCAGGTGCTCCAGGAGGCGCTCAAAGCCCGG
CAGGCCCAGAACCAGGGCCAGCAGAACCAGGCCCCCCCCACCCGGGAGGCCACGGTGGTGGCCGACCCCAGGACCAACAC
CCTCATCGTCACCGGCACCCAGGAGGACCTCGCCCTGGTGGAGGGCCTCATCCCCAAGCTGGACCAGCCTGTGCCCCAGG
TTTCCTTGCGGGTGCGCATCCAGGAGGTCCAGTCCAACCTGACCCGTAGTCTCGGCCTCAAGTGGAACAGCATCGCCGGC
GGCAATGCGGCGGCCAGCATCCTGGACTCGGGGCTTTCCCTCATCTTTGACTCCACGCGAAGCCTCGCCGCCCTCAACAT
CATGGCCACCCTGGACGCCCTGCAGCAACAGGGCCTCTCCCGGGCCCTCCGGGACGTGAACCAGACCGTCCTCAACAACC
AGACCGCCCGCCTGCAGTCCGGCGAGACCTTCTTCATCCGGCGGGTGGTGAACGACCAGGTGGAACGGGTCCCCTTTGAC
GTGGGGCTCATCGTGGAGGTCACGCCCCAGATCACCGCCGACGGCCAGATCCTCCTCAACATCAAGGCCGAGGTCTCGGG
GAACGTCCAGCGCAACCCCGTGGACGGGGACGTGGACCGCTTCACCAAGCAGGTGGTGACCACCACCCTCAGGGTCAAGG
ACGGGGAGACCGTGGTCCTCGGGGGCCTCACCTCCCAGGAGTCCAACCAGAGCCAGCAGGGGGTGCCCCTCCTCATGGAC
ATCCCCCTGATCGGCGAGCTCTTCAAGCAGCGGACGAACGAGAGCACCGACAAGGAGCTTTTGGTGGTGATCACCGCCGA
CATCCTCAAGGAGACGGCCTCGGCGAACCCCTAA

Domains

Predicted by InterproScan.

• Bacterial type II and III secretion system protein (Secretin) (593-750)

• Bacterial type II/III secretion system short domain (Secretin_N) (391-450)

• Bacterial type II/III secretion system short domain (Secretin_N) (457-533)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilQ	Thermus thermophilus HB27	98.018	100	0.98