Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACK3C0_RS07270 | Genome accession | NZ_CP176810 |
| Coordinates | 1572752..1573246 (-) | Length | 164 a.a. |
| NCBI ID | WP_004083791.1 | Uniprot ID | Q9PDI7 |
| Organism | Xylella fastidiosa subsp. multiplex strain IAS-AXF64H11 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1567752..1578246
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACK3C0_RS07255 (ACK3C0_07255) | gloA | 1568039..1568566 (+) | 528 | WP_004083787.1 | lactoylglutathione lyase | - |
| ACK3C0_RS07260 (ACK3C0_07260) | - | 1568728..1569924 (-) | 1197 | WP_027700010.1 | cation:proton antiporter | - |
| ACK3C0_RS07265 (ACK3C0_07265) | - | 1570245..1571155 (-) | 911 | Protein_1414 | class I SAM-dependent methyltransferase | - |
| ACK3C0_RS07270 (ACK3C0_07270) | ssb | 1572752..1573246 (-) | 495 | WP_004083791.1 | single-stranded DNA-binding protein | Machinery gene |
| ACK3C0_RS07275 (ACK3C0_07275) | - | 1573495..1574496 (+) | 1002 | WP_004083792.1 | polyprenyl synthetase family protein | - |
| ACK3C0_RS07280 (ACK3C0_07280) | cyoA | 1574959..1575918 (+) | 960 | WP_004083793.1 | ubiquinol oxidase subunit II | - |
| ACK3C0_RS07285 (ACK3C0_07285) | cyoB | 1575912..1577909 (+) | 1998 | WP_004083794.1 | cytochrome o ubiquinol oxidase subunit I | - |
Sequence
Protein
Download Length: 164 a.a. Molecular weight: 18211.20 Da Isoelectric Point: 5.9575
>NTDB_id=1083201 ACK3C0_RS07270 WP_004083791.1 1572752..1573246(-) (ssb) [Xylella fastidiosa subsp. multiplex strain IAS-AXF64H11]
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQERTEWHRVKFFGKLGEIAGEYLRKGSQCYIEG
SIRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQARQPSQSPQSSPPPMDDFADD
DIPF
MARGINKVILVGNLGNDPDIKYTQGGMTITTISLATTSVRKDKEGNTQERTEWHRVKFFGKLGEIAGEYLRKGSQCYIEG
SIRYDKFTGQDGQERYVTEIVADEMQMLGGRSDGGGMGGGGERPQRQTSQRQDYAPRRQARQPSQSPQSSPPPMDDFADD
DIPF
Nucleotide
Download Length: 495 bp
>NTDB_id=1083201 ACK3C0_RS07270 WP_004083791.1 1572752..1573246(-) (ssb) [Xylella fastidiosa subsp. multiplex strain IAS-AXF64H11]
ATGGCCCGTGGTATCAATAAAGTCATCCTCGTCGGTAACCTCGGTAACGATCCGGATATCAAATACACCCAAGGTGGTAT
GACGATCACTACCATCAGCTTGGCGACAACCAGTGTTCGTAAGGACAAGGAGGGCAATACCCAGGAGCGGACCGAATGGC
ACAGGGTCAAGTTTTTCGGAAAACTCGGTGAGATTGCCGGGGAATATCTACGTAAGGGATCACAGTGCTATATCGAAGGG
AGCATTCGCTATGACAAGTTCACTGGCCAGGATGGTCAGGAGCGCTATGTTACAGAGATTGTTGCTGATGAGATGCAAAT
GTTGGGTGGCCGTAGCGATGGTGGCGGTATGGGCGGGGGCGGTGAGCGCCCACAGCGTCAAACATCGCAGCGTCAGGATT
ACGCCCCACGTCGCCAGGCCCGTCAGCCGTCACAGTCGCCGCAATCTTCACCGCCGCCGATGGACGATTTCGCTGATGAC
GATATTCCTTTCTAA
ATGGCCCGTGGTATCAATAAAGTCATCCTCGTCGGTAACCTCGGTAACGATCCGGATATCAAATACACCCAAGGTGGTAT
GACGATCACTACCATCAGCTTGGCGACAACCAGTGTTCGTAAGGACAAGGAGGGCAATACCCAGGAGCGGACCGAATGGC
ACAGGGTCAAGTTTTTCGGAAAACTCGGTGAGATTGCCGGGGAATATCTACGTAAGGGATCACAGTGCTATATCGAAGGG
AGCATTCGCTATGACAAGTTCACTGGCCAGGATGGTCAGGAGCGCTATGTTACAGAGATTGTTGCTGATGAGATGCAAAT
GTTGGGTGGCCGTAGCGATGGTGGCGGTATGGGCGGGGGCGGTGAGCGCCCACAGCGTCAAACATCGCAGCGTCAGGATT
ACGCCCCACGTCGCCAGGCCCGTCAGCCGTCACAGTCGCCGCAATCTTCACCGCCGCCGATGGACGATTTCGCTGATGAC
GATATTCCTTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
49.153 |
100 |
0.53 |
| ssb | Glaesserella parasuis strain SC1401 |
45.81 |
100 |
0.5 |
| ssb | Neisseria meningitidis MC58 |
41.618 |
100 |
0.439 |
| ssb | Neisseria gonorrhoeae MS11 |
41.04 |
100 |
0.433 |