Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   AACH71_RS17990 Genome accession   NZ_AP029050
Coordinates   3551354..3552253 (+) Length   299 a.a.
NCBI ID   WP_103750156.1    Uniprot ID   -
Organism   Bacillus stercoris strain BST19     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3546354..3557253
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AACH71_RS17960 (BSB_34600) - 3546819..3547370 (+) 552 WP_014665196.1 isochorismatase family cysteine hydrolase -
  AACH71_RS17965 (BSB_34610) - 3547386..3548858 (+) 1473 WP_014665195.1 nicotinate phosphoribosyltransferase -
  AACH71_RS17970 (BSB_34620) pdeH 3548994..3550223 (+) 1230 WP_014665194.1 cyclic di-GMP phosphodiesterase -
  AACH71_RS17975 (BSB_34630) - 3550199..3550567 (-) 369 WP_014665193.1 hypothetical protein -
  AACH71_RS17980 - 3550682..3550807 (-) 126 WP_128422565.1 hypothetical protein -
  AACH71_RS17985 (BSB_34640) degQ 3551029..3551169 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  AACH71_RS17990 (BSB_34650) comQ 3551354..3552253 (+) 900 WP_103750156.1 ComX modifying isoprenyl transferase ComQ Regulator
  AACH71_RS17995 (BSB_34660) comX 3552241..3552408 (+) 168 WP_003242801.1 competence pheromone ComX Regulator
  AACH71_RS18000 comP 3552423..3554732 (+) 2310 Protein_3505 two-component system sensor histidine kinase ComP -
  AACH71_RS18005 (BSB_34700) comA 3554813..3555457 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  AACH71_RS18010 (BSB_34710) - 3555475..3555855 (+) 381 WP_040081970.1 hotdog fold thioesterase -
  AACH71_RS18015 (BSB_34720) mnhG 3555894..3556268 (-) 375 WP_014665188.1 monovalent cation/H(+) antiporter subunit G -
  AACH71_RS18020 (BSB_34730) - 3556252..3556536 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  AACH71_RS18025 (BSB_34740) - 3556536..3557012 (-) 477 WP_014665187.1 Na+/H+ antiporter subunit E -

Sequence


Protein


Download         Length: 299 a.a.        Molecular weight: 34264.14 Da        Isoelectric Point: 4.8411

>NTDB_id=108295 AACH71_RS17990 WP_103750156.1 3551354..3552253(+) (comQ) [Bacillus stercoris strain BST19]
MKEIVEQNIFNEDLSQLLYSFIDSKETFSFAESTILHYVVFGGENLDVATRLGAGIEILILSSDIMDDLEDEDNHHALWM
KINRSESLNAALSLYTVGLTSIYSLNNNPLIFKYVLKYVNEAMQGQHDDITNKSKTEDESLEVIRLKCGSLIALANVAGV
LLATEEYNETVERYSYYKGIIAQISGDYHVLLSGNRSDIEKNKHTLIYLYLKRLFNDASEDLLYLISHKDLYYKSLLDKE
KFQEKLIKAGVTQYISVLLEIYKQKCISAIEQLNLDKEKKELIKECLLSYTKGDTRCKT

Nucleotide


Download         Length: 900 bp        

>NTDB_id=108295 AACH71_RS17990 WP_103750156.1 3551354..3552253(+) (comQ) [Bacillus stercoris strain BST19]
ATGAAGGAGATTGTGGAGCAAAACATATTTAACGAGGATTTGTCACAACTTCTTTACTCATTTATTGATTCTAAAGAAAC
ATTCTCCTTTGCTGAATCCACAATCTTACATTATGTTGTTTTTGGAGGGGAGAATTTAGATGTTGCAACAAGGCTTGGCG
CGGGAATAGAAATTCTTATTCTTTCATCAGATATTATGGATGATCTTGAAGATGAAGATAATCACCATGCATTATGGATG
AAAATTAATCGCTCGGAGTCGTTAAATGCAGCACTTTCCTTGTATACAGTAGGATTAACGAGTATTTATTCATTAAATAA
CAATCCTCTAATTTTTAAATATGTTTTAAAATACGTAAACGAGGCCATGCAAGGTCAACATGACGATATCACTAATAAAT
CTAAAACAGAAGATGAAAGTTTAGAAGTAATTAGATTAAAATGTGGAAGTCTGATTGCACTAGCAAATGTAGCAGGTGTT
TTATTGGCTACAGAAGAATATAATGAAACAGTTGAAAGATATTCCTACTATAAAGGGATTATAGCTCAAATTTCTGGAGA
CTATCATGTTCTTTTATCCGGAAATCGCAGTGATATTGAAAAAAACAAACATACACTGATTTACTTATATCTTAAGCGCC
TTTTTAATGATGCTTCGGAAGATTTATTATACTTAATTTCACATAAAGACTTATATTATAAATCGTTACTTGATAAAGAG
AAATTCCAAGAAAAATTAATTAAAGCGGGAGTTACTCAATACATTTCGGTATTATTGGAAATATATAAACAGAAATGTAT
TTCTGCTATAGAACAATTAAATTTAGATAAAGAAAAAAAAGAGCTAATAAAGGAATGCTTATTAAGTTATACAAAGGGGG
ATACAAGATGCAAGACCTAA

Domains


Predicted by InterproScan.

(44-218)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

99.331

100

0.993


Multiple sequence alignment