Detailed information NTG1082650

Bioinformatically predicted

Overview

• Name: ssbA
• Type: Machinery gene
• Locus tag: ACK2V1_RS12275
• Genome accession: NZ_CP176715
• Coordinates: 2426924..2427427 (-)
• Length: 167 a.a.
• NCBI ID: WP_000934799.1
• Uniprot ID: A0A7U7IE99
• Organism: Staphylococcus aureus strain GTVSS-007
• Function: ssDNA binding (predicted from homology) DNA processing

Genomic Context

Location: 2421924..2432427

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACK2V1_RS12230 (ACK2V1_12230)	tscT	2421942..2422265 (-)	324	WP_001103945.1	type II toxin-antitoxin system toxin TscT	-
ACK2V1_RS12235 (ACK2V1_12235)	tscA	2422268..2422477 (-)	210	WP_001058486.1	type II toxin-antitoxin system antitoxin TscA	-
ACK2V1_RS12240 (ACK2V1_12240)	-	2422470..2422616 (-)	147	WP_000784875.1	hypothetical protein	-
ACK2V1_RS12245 (ACK2V1_12245)	-	2422628..2422900 (-)	273	WP_001138300.1	helix-turn-helix domain-containing protein	-
ACK2V1_RS12250 (ACK2V1_12250)	-	2422901..2423113 (-)	213	WP_001245562.1	helix-turn-helix domain-containing protein	-
ACK2V1_RS12255 (ACK2V1_12255)	-	2423286..2424011 (+)	726	WP_000668215.1	helix-turn-helix domain-containing protein	-
ACK2V1_RS12260 (ACK2V1_12260)	-	2424275..2425489 (+)	1215	WP_031765313.1	tyrosine-type recombinase/integrase	-
ACK2V1_RS12265 (ACK2V1_12265)	-	2425491..2426391 (+)	901	Protein_2372	Abi family protein	-
ACK2V1_RS12270 (ACK2V1_12270)	rpsR	2426630..2426872 (-)	243	WP_000897044.1	30S ribosomal protein S18	-
ACK2V1_RS12275 (ACK2V1_12275)	ssbA	2426924..2427427 (-)	504	WP_000934799.1	single-stranded DNA-binding protein	Machinery gene
ACK2V1_RS12280 (ACK2V1_12280)	rpsF	2427448..2427744 (-)	297	WP_001261460.1	30S ribosomal protein S6	-
ACK2V1_RS12285 (ACK2V1_12285)	-	2427988..2428179 (+)	192	WP_001052484.1	hypothetical protein	-
ACK2V1_RS12290 (ACK2V1_12290)	ychF	2428265..2429362 (-)	1098	WP_001218732.1	redox-regulated ATPase YchF	-
ACK2V1_RS12295 (ACK2V1_12295)	-	2429374..2429577 (-)	204	WP_000157348.1	DUF951 domain-containing protein	-
ACK2V1_RS12300 (ACK2V1_12300)	-	2429607..2430488 (-)	882	WP_000373073.1	mechanosensitive ion channel family protein	-
ACK2V1_RS12305 (ACK2V1_12305)	-	2430642..2431487 (-)	846	WP_001557587.1	ParB/RepB/Spo0J family partition protein	-

Sequence

Protein

• Length: 167 a.a.
• Molecular weight: 18539.12 Da
• Isoelectric Point: 4.7305

>NTDB_id=1082650 ACK2V1_RS12275 WP_000934799.1 2426924..2427427(-) (ssbA) [Staphylococcus aureus strain GTVSS-007]
MLNRVVLVGRLTKDPEYRTTPSGVSVATFTLAVNRTFTNAQGEREADFINCVVFRRQADNVNNYLSKGSLAGVDGRLQSR
NYENQEGRRVFVTEVVCDSVQFLEPKNAQQNGGQRQQNEFQDYGQGFGGQQSGQNNSYNNSSNTKQSDNPFANANGPIDI
SDDDLPF

Nucleotide

• Length: 504 bp

>NTDB_id=1082650 ACK2V1_RS12275 WP_000934799.1 2426924..2427427(-) (ssbA) [Staphylococcus aureus strain GTVSS-007]
ATGCTAAATAGAGTTGTATTAGTAGGTCGTTTAACGAAAGATCCGGAATACAGAACCACTCCCTCAGGTGTGAGTGTAGC
GACATTCACTCTTGCAGTAAATCGTACGTTCACGAATGCTCAAGGGGAGCGCGAAGCAGATTTTATTAACTGTGTTGTTT
TTAGAAGACAAGCAGATAATGTAAATAACTATTTATCTAAAGGTAGTTTAGCTGGTGTAGATGGTCGCTTACAATCCCGT
AATTATGAAAATCAAGAAGGTCGTCGTGTGTTTGTTACTGAAGTTGTGTGTGATAGCGTTCAATTCCTTGAACCTAAAAA
TGCGCAACAAAATGGTGGCCAACGTCAACAAAATGAATTCCAAGATTACGGTCAAGGATTCGGTGGTCAACAATCAGGAC
AAAACAATTCGTACAATAATTCATCAAACACGAAACAATCTGATAATCCATTTGCAAATGCAAACGGACCGATTGATATA
AGTGATGATGACTTACCATTCTAA

Domains

Predicted by InterproScan.

• Single-strand binding protein family (SSB) (2-103)

3D structure

• AlphaFold DB: A0A7U7IE99

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ssbA	Bacillus subtilis subsp. subtilis str. 168	65.341	100	0.689
ssb	Latilactobacillus sakei subsp. sakei 23K	54.971	100	0.563
ssbB	Bacillus subtilis subsp. subtilis str. 168	58.491	63.473	0.371
ssb	Glaesserella parasuis strain SC1401	34.463	100	0.365