Detailed information NTG1080703

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACKW6F_RS16615
• Genome accession: NZ_CP176527
• Coordinates: 3240392..3241567 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain D-62
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3235392..3246567

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKW6F_RS16585 (ACKW6F_16585)	-	3235562..3235981 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
ACKW6F_RS16590 (ACKW6F_16590)	comFC	3236038..3236694 (-)	657	WP_244948474.1	ComF family protein	Machinery gene
ACKW6F_RS16595 (ACKW6F_16595)	-	3236721..3237014 (-)	294	WP_025093967.1	late competence development ComFB family protein	-
ACKW6F_RS16600 (ACKW6F_16600)	comFA	3237063..3238460 (-)	1398	WP_276507389.1	DEAD/DEAH box helicase	Machinery gene
ACKW6F_RS16605 (ACKW6F_16605)	-	3238581..3239423 (-)	843	WP_024423625.1	DegV family protein	-
ACKW6F_RS16610 (ACKW6F_16610)	degU	3239638..3240327 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ACKW6F_RS16615 (ACKW6F_16615)	degS	3240392..3241567 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
ACKW6F_RS16620 (ACKW6F_16620)	-	3241788..3242456 (+)	669	WP_012011434.1	YigZ family protein	-
ACKW6F_RS16625 (ACKW6F_16625)	-	3242441..3243532 (+)	1092	WP_024423626.1	LCP family protein	-
ACKW6F_RS16630 (ACKW6F_16630)	-	3243568..3244635 (-)	1068	WP_024423627.1	glycosyltransferase family 4 protein	-
ACKW6F_RS16635 (ACKW6F_16635)	tuaH	3244770..3245966 (-)	1197	WP_311165397.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=1080703 ACKW6F_RS16615 WP_003213166.1 3240392..3241567(-) (degS) [Bacillus safensis strain D-62]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=1080703 ACKW6F_RS16615 WP_003213166.1 3240392..3241567(-) (degS) [Bacillus safensis strain D-62]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAATCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTGAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGTCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGGAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTTCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAACATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGATTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTTATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841