Detailed information NTG1080197

Bioinformatically predicted

Overview

• Name: pilU
• Type: Machinery gene
• Locus tag: ACJ3XG_RS10065
• Genome accession: NZ_CP176468
• Coordinates: 2237731..2238840 (+)
• Length: 369 a.a.
• NCBI ID: WP_290039387.1
• Uniprot ID: -
• Organism: Psychromonas sp. GE-S-Ul-11
• Function: type IV pilus retraction (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2232731..2243840

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACJ3XG_RS10040 (ACJ3XG_10040)	-	2233761..2234375 (-)	615	WP_290039392.1	XTP/dITP diphosphatase	-
ACJ3XG_RS10045 (ACJ3XG_10045)	-	2234542..2235087 (-)	546	WP_290039391.1	YggT family protein	-
ACJ3XG_RS10050 (ACJ3XG_10050)	proC	2235125..2235949 (-)	825	WP_290039390.1	pyrroline-5-carboxylate reductase	-
ACJ3XG_RS10055 (ACJ3XG_10055)	-	2235974..2236666 (-)	693	WP_409438872.1	YggS family pyridoxal phosphate-dependent enzyme	-
ACJ3XG_RS10060 (ACJ3XG_10060)	pilT	2236687..2237721 (+)	1035	WP_290039388.1	type IV pilus twitching motility protein PilT	Machinery gene
ACJ3XG_RS10065 (ACJ3XG_10065)	pilU	2237731..2238840 (+)	1110	WP_290039387.1	PilT/PilU family type 4a pilus ATPase	Machinery gene
ACJ3XG_RS10070 (ACJ3XG_10070)	yaaA	2238909..2239685 (+)	777	WP_409438873.1	peroxide stress protein YaaA	-
ACJ3XG_RS10075 (ACJ3XG_10075)	-	2239772..2240578 (-)	807	WP_409438874.1	Cof-type HAD-IIB family hydrolase	-
ACJ3XG_RS10080 (ACJ3XG_10080)	-	2240566..2241579 (-)	1014	WP_409438875.1	alpha/beta fold hydrolase	-
ACJ3XG_RS10085 (ACJ3XG_10085)	-	2241700..2243415 (-)	1716	WP_290039383.1	proline--tRNA ligase	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 40596.30 Da
• Isoelectric Point: 6.2872

>NTDB_id=1080197 ACJ3XG_RS10065 WP_290039387.1 2237731..2238840(+) (pilU) [Psychromonas sp. GE-S-Ul-11]
MLDELLSSLDRLKASDLYISVGLPPTVKLNGRLSSLSDDKMTSEDIYNLLARTMDDQGIAQFKSQKEANFALHLEGLGRF
RISAFMQKNNPGMVVRRINDKIPTSDELYLPDQLKEICMAKSGLVLFVGPTGSGKSTTLAAMVGFRNQHASGHILTIEDP
IEFVHEHARSVVTQREVGLDTDSIEEALRNATRQAPDVIVQGEIRSAVSMSHAISHAQTGYLSMATLNANSTDKALEQML
HYIPEERHNQFLNELSVNLKAIVAQRLIPTLDEKGSVAAFEVMVNSPALSNAIRKGERHLLKDIMKASKQAGMQTLDQAL
FKLYSEAKISYSEALAHADSANDLRLMIKLKVGSSSNLASDSLNEFTID

Nucleotide

• Length: 1110 bp

>NTDB_id=1080197 ACJ3XG_RS10065 WP_290039387.1 2237731..2238840(+) (pilU) [Psychromonas sp. GE-S-Ul-11]
ATGCTAGATGAGTTATTAAGTTCTTTAGATCGATTAAAAGCCTCAGACCTTTATATTTCAGTGGGCTTACCACCGACAGT
TAAACTCAATGGGCGTTTATCTTCCCTATCCGATGATAAGATGACATCTGAAGATATTTATAATTTATTAGCGCGTACTA
TGGATGATCAAGGCATCGCTCAGTTTAAAAGCCAAAAAGAAGCTAACTTTGCATTACATCTTGAAGGGCTAGGGCGTTTC
CGTATTAGTGCTTTTATGCAAAAAAATAATCCTGGTATGGTAGTGCGTCGTATTAACGACAAGATTCCAACCAGCGATGA
ATTATACCTTCCAGATCAGCTGAAAGAGATTTGCATGGCTAAGTCTGGTTTAGTGTTATTTGTTGGGCCTACTGGATCTG
GCAAGTCTACAACACTAGCCGCGATGGTGGGGTTTCGTAATCAACATGCATCTGGGCATATATTAACCATTGAAGATCCC
ATTGAGTTTGTGCATGAGCATGCTCGCTCAGTGGTCACGCAGCGTGAAGTGGGATTAGATACTGACTCGATTGAAGAAGC
ATTACGTAATGCGACTCGTCAAGCACCGGATGTGATTGTACAAGGTGAAATTCGTAGTGCGGTGAGCATGTCGCATGCTA
TTAGCCATGCACAAACTGGCTATTTAAGTATGGCAACGCTTAATGCAAATAGTACCGATAAAGCACTGGAGCAGATGCTA
CATTACATACCTGAAGAACGCCATAATCAGTTTTTAAACGAGCTTTCGGTCAATTTAAAAGCAATTGTTGCACAACGTCT
TATTCCGACTTTAGATGAAAAAGGCAGTGTTGCTGCCTTTGAAGTAATGGTTAATTCACCTGCATTATCTAATGCGATTC
GTAAAGGGGAACGACACCTGCTAAAAGATATTATGAAAGCATCTAAACAAGCGGGAATGCAAACCTTAGATCAGGCGTTA
TTTAAATTATATTCAGAAGCAAAAATTAGTTATAGTGAAGCTCTAGCACATGCAGATTCAGCCAATGATCTACGCTTAAT
GATTAAATTAAAAGTTGGGTCAAGTTCTAACCTTGCTTCGGATAGCTTAAATGAATTTACTATCGACTGA

Domains

Predicted by InterproScan.

• Type II/IV secretion system protein (T2SSE) (48-269)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilU	Vibrio cholerae strain A1552	52.989	99.729	0.528
pilU	Pseudomonas stutzeri DSM 10701	52.149	94.58	0.493
pilU	Acinetobacter baylyi ADP1	50.857	94.851	0.482
pilT	Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539	38.462	95.122	0.366