Detailed information NTG1079995

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACKWCM_RS16735
• Genome accession: NZ_CP176416
• Coordinates: 3263341..3264516 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain GUCCb3-7
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3258341..3269516

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACKWCM_RS16705 (ACKWCM_16705)	-	3258510..3258929 (-)	420	WP_024423621.1	TIGR03826 family flagellar region protein	-
ACKWCM_RS16710 (ACKWCM_16710)	comFC	3258986..3259642 (-)	657	WP_244948474.1	ComF family protein	Machinery gene
ACKWCM_RS16715 (ACKWCM_16715)	-	3259669..3259962 (-)	294	WP_025093967.1	late competence development ComFB family protein	-
ACKWCM_RS16720 (ACKWCM_16720)	comFA	3260011..3261411 (-)	1401	WP_409362645.1	DEAD/DEAH box helicase	Machinery gene
ACKWCM_RS16725 (ACKWCM_16725)	-	3261529..3262371 (-)	843	WP_024423625.1	DegV family protein	-
ACKWCM_RS16730 (ACKWCM_16730)	degU	3262587..3263276 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
ACKWCM_RS16735 (ACKWCM_16735)	degS	3263341..3264516 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
ACKWCM_RS16740 (ACKWCM_16740)	-	3264738..3265406 (+)	669	WP_012011434.1	YigZ family protein	-
ACKWCM_RS16745 (ACKWCM_16745)	-	3265391..3266482 (+)	1092	WP_024423626.1	LCP family protein	-
ACKWCM_RS16750 (ACKWCM_16750)	-	3266518..3267585 (-)	1068	WP_024423627.1	glycosyltransferase family 4 protein	-
ACKWCM_RS16755 (ACKWCM_16755)	tuaH	3267720..3268916 (-)	1197	WP_311165397.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=1079995 ACKWCM_RS16735 WP_003213166.1 3263341..3264516(-) (degS) [Bacillus safensis strain GUCCb3-7]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=1079995 ACKWCM_RS16735 WP_003213166.1 3263341..3264516(-) (degS) [Bacillus safensis strain GUCCb3-7]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATCAAACAGCAAG
TAAACGAAGTAATTGATTTTGGGGATAAGCTGGAAGTCCATACAAGACATGCTAGAAACCGCTTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
TCAGCAGCGCGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGAAGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAATCAGGATTTACGCCAGGTTGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGGCTGAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGGATTTTTAGAGACCGCG
GTACAGAAGAAGGTTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGGAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAACATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCACTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841