Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACJJU9_RS02410 | Genome accession | NZ_CP174501 |
| Coordinates | 505599..506120 (+) | Length | 173 a.a. |
| NCBI ID | WP_048373818.1 | Uniprot ID | A0A0J6JCX3 |
| Organism | Pseudomonas helleri strain NF1a | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 500599..511120
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACJJU9_RS02395 (ACJJU9_02395) | bfr | 500601..501065 (+) | 465 | WP_048373825.1 | bacterioferritin | - |
| ACJJU9_RS02400 (ACJJU9_02400) | uvrA | 501136..503970 (-) | 2835 | WP_407729957.1 | excinuclease ABC subunit UvrA | - |
| ACJJU9_RS02405 (ACJJU9_02405) | - | 504198..505589 (+) | 1392 | WP_048373821.1 | MFS transporter | - |
| ACJJU9_RS02410 (ACJJU9_02410) | ssb | 505599..506120 (+) | 522 | WP_048373818.1 | single-stranded DNA-binding protein | Machinery gene |
| ACJJU9_RS02415 (ACJJU9_02415) | - | 506271..507848 (-) | 1578 | WP_407729958.1 | aldehyde dehydrogenase (NADP(+)) | - |
| ACJJU9_RS02420 (ACJJU9_02420) | - | 507920..509344 (-) | 1425 | WP_407729959.1 | FAD-binding oxidoreductase | - |
| ACJJU9_RS02425 (ACJJU9_02425) | - | 509341..509883 (-) | 543 | WP_407729960.1 | permease | - |
| ACJJU9_RS02430 (ACJJU9_02430) | - | 509931..511022 (-) | 1092 | WP_407729961.1 | ABC transporter permease | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 19348.43 Da Isoelectric Point: 5.9314
>NTDB_id=1077364 ACJJU9_RS02410 WP_048373818.1 505599..506120(+) (ssb) [Pseudomonas helleri strain NF1a]
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQGDQQNQGGGNNYQQSAPRQQAQRPAPQQQQQQSRPAPQQQAPQP
AADFDSFDDDIPF
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQGDQQNQGGGNNYQQSAPRQQAQRPAPQQQQQQSRPAPQQQAPQP
AADFDSFDDDIPF
Nucleotide
Download Length: 522 bp
>NTDB_id=1077364 ACJJU9_RS02410 WP_048373818.1 505599..506120(+) (ssb) [Pseudomonas helleri strain NF1a]
ATGGCCCGTGGGGTTAACAAAGTTATATTGGTCGGCACATGCGGCCAGGATCCCGAAGTTCGCTACTTGCCTAACGGTAA
TGCCGTGACCAACTTGAGTCTGGCAACCAGCGAACAATGGACCGACAAACAAACCGGTCAGAAAGTCGAAAAGACTGAAT
GGCACCGTGTATCGATGTTCGGCAAAGTGGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGGTGTACATCGAA
GGCAAGCTGCAAACCCGTGAGTGGGAAAAAGACGGTATCAAGCGTTACACCACCGAAATCGTGGTCGACATGCAAGGCAC
CATGCAGCTGCTGGGTGGCCGTCCACAGGGCGACCAACAAAACCAGGGCGGTGGTAACAACTACCAGCAATCCGCTCCGC
GTCAGCAGGCACAACGCCCTGCGCCGCAGCAACAGCAGCAACAGTCGCGTCCAGCGCCGCAACAGCAGGCTCCACAGCCA
GCCGCTGACTTCGACAGCTTCGACGACGATATTCCGTTCTAA
ATGGCCCGTGGGGTTAACAAAGTTATATTGGTCGGCACATGCGGCCAGGATCCCGAAGTTCGCTACTTGCCTAACGGTAA
TGCCGTGACCAACTTGAGTCTGGCAACCAGCGAACAATGGACCGACAAACAAACCGGTCAGAAAGTCGAAAAGACTGAAT
GGCACCGTGTATCGATGTTCGGCAAAGTGGCCGAAATCGCTGGCGAATACCTGCGCAAGGGTTCGCAGGTGTACATCGAA
GGCAAGCTGCAAACCCGTGAGTGGGAAAAAGACGGTATCAAGCGTTACACCACCGAAATCGTGGTCGACATGCAAGGCAC
CATGCAGCTGCTGGGTGGCCGTCCACAGGGCGACCAACAAAACCAGGGCGGTGGTAACAACTACCAGCAATCCGCTCCGC
GTCAGCAGGCACAACGCCCTGCGCCGCAGCAACAGCAGCAACAGTCGCGTCCAGCGCCGCAACAGCAGGCTCCACAGCCA
GCCGCTGACTTCGACAGCTTCGACGACGATATTCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
59.091 |
100 |
0.601 |
| ssb | Glaesserella parasuis strain SC1401 |
48.066 |
100 |
0.503 |
| ssb | Neisseria gonorrhoeae MS11 |
48.333 |
100 |
0.503 |
| ssb | Neisseria meningitidis MC58 |
47.778 |
100 |
0.497 |