Detailed information NTG1074786

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACCO34_RS17985
• Genome accession: NZ_CP174160
• Coordinates: 3542489..3543652 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SMT-24
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3537489..3548652

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACCO34_RS17955	-	3537755..3538174 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
ACCO34_RS17960	comFC	3538248..3538937 (-)	690	WP_197080391.1	phosphoribosyltransferase family protein	Machinery gene
ACCO34_RS17965	-	3538943..3539227 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
ACCO34_RS17970	comFA	3539285..3540670 (-)	1386	WP_139889935.1	DEAD/DEAH box helicase	Machinery gene
ACCO34_RS17975	-	3540777..3541625 (-)	849	WP_139889934.1	DegV family protein	-
ACCO34_RS17980	degU	3541723..3542412 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACCO34_RS17985	degS	3542489..3543652 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
ACCO34_RS17990	-	3543875..3544522 (+)	648	WP_003151384.1	YigZ family protein	-
ACCO34_RS17995	-	3544527..3545741 (+)	1215	WP_003151383.1	LCP family protein	-
ACCO34_RS18000	-	3545831..3546907 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
ACCO34_RS18005	tuaH	3547040..3548236 (-)	1197	WP_003151381.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=1074786 ACCO34_RS17985 WP_003151385.1 3542489..3543652(-) (degS) [Bacillus velezensis strain SMT-24]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1074786 ACCO34_RS17985 WP_003151385.1 3542489..3543652(-) (degS) [Bacillus velezensis strain SMT-24]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948