Detailed information NTG1073977

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACI703_RS04580
• Genome accession: NZ_CP173765
• Coordinates: 1033649..1035022 (-)
• Length: 457 a.a.
• NCBI ID: WP_406234979.1
• Uniprot ID: -
• Organism: Isoptericola jiangsuensis strain JSH01
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1028649..1040022

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI703_RS04565 (ACI703_04565)	-	1029015..1030559 (+)	1545	WP_406234973.1	NAD(P)/FAD-dependent oxidoreductase	-
ACI703_RS04570 (ACI703_04570)	galE	1030662..1031639 (+)	978	WP_406234975.1	UDP-glucose 4-epimerase GalE	-
ACI703_RS04575 (ACI703_04575)	pilB	1031754..1033481 (+)	1728	WP_406234977.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACI703_RS04580 (ACI703_04580)	pilR	1033649..1035022 (-)	1374	WP_406234979.1	sigma-54-dependent transcriptional regulator	Regulator
ACI703_RS04585 (ACI703_04585)	-	1035078..1036691 (-)	1614	WP_406234981.1	sensor histidine kinase	-
ACI703_RS04590 (ACI703_04590)	sucC	1037116..1038285 (+)	1170	WP_079222939.1	ADP-forming succinate--CoA ligase subunit beta	-
ACI703_RS04595 (ACI703_04595)	sucD	1038307..1039182 (+)	876	WP_108760494.1	succinate--CoA ligase subunit alpha	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49604.84 Da
• Isoelectric Point: 6.5118

>NTDB_id=1073977 ACI703_RS04580 WP_406234979.1 1033649..1035022(-) (pilR) [Isoptericola jiangsuensis strain JSH01]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHALELNNSERPVAAAASEQAGRLLGDSAAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARASGPFIPVNCGAIPTELMESEFFGHRKGSFTGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRALGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELKVPPLRERRQDLPD
LAGSILARLARSHGRATPLLAPSALDALAHYGFPGNVRELENILERALALAEEDRIGADDLRLPQHAPRTAGGPAAPEAV
VDLHPGSAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=1073977 ACI703_RS04580 WP_406234979.1 1033649..1035022(-) (pilR) [Isoptericola jiangsuensis strain JSH01]
ATGAACGAAACCCGCAGCGCCCTCGTCGTCGACGATGAACGCGACATCCGCGAACTGCTGGTGCTGACCCTTGGCCGCAT
GGGCCTTCGCATCAGCACCGCCGCCAATCTCGCCGAAGCCCGCGAACTGCTGGCCAGCAACCCGTACGACCTGTGCATCA
CCGACATGCGGCTGCCGGACGGCAACGGCATCGAGCTGGTCAGCGAGATCGCCCAGCATTACCCGCGTACGCCGGTGGCG
ATGATCACCGCCTTCGGCAGCATGGACCTGGCCGTGGAGGCACTGAAGGCCGGTGCCTTCGACTTCGTCAGCAAGCCGGT
GGACATCAGCGTGCTGCGTGGCCTGGTCAAGCACGCGCTGGAACTCAACAACAGCGAGCGCCCGGTCGCCGCGGCCGCCA
GCGAACAGGCCGGCCGCCTGCTCGGCGATTCGGCCGCCATGGATGTGCTGCGCACCACCATCGGCAAGGTCGCCCGCAGC
CAGGCGCCGGTCTACATCCTCGGCGAATCCGGGGTGGGCAAGGAGCTGGTCGCACGTACCATCCACGCGCAGGGCGCACG
CGCCTCGGGCCCCTTCATTCCGGTCAACTGCGGCGCCATCCCGACCGAGCTGATGGAGAGCGAGTTCTTCGGCCACCGCA
AGGGCAGCTTCACCGGCGCCCACGCCGACAAGCCCGGCCTGTTCCAGGCCGCGCACGGCGGCACCCTGTTCCTGGATGAA
GTGGCCGAGCTGCCGCTGCAGATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAGTCGGTGCGCGCATTGGGCGCAGC
CAACGAGGAACCGGTGGATGTGCGCATCCTCTCGGCCACCCACAAGGACCTGGCCGAGCTGGTCGAGGACGGCCGCTTCC
GCCACGACCTGTACTACCGCATCAACGTCATCGAACTGAAGGTACCGCCGCTGCGCGAGCGCCGCCAGGACCTGCCGGAC
CTGGCCGGTTCGATCCTCGCCCGGCTGGCGCGCAGCCATGGCCGCGCCACCCCGCTGCTGGCGCCCTCGGCACTGGACGC
GCTGGCCCATTACGGCTTCCCGGGCAATGTGCGCGAGCTGGAGAACATCCTTGAGCGCGCCCTGGCCCTGGCCGAGGAAG
ACCGCATCGGTGCCGACGACCTGCGCCTGCCGCAGCACGCCCCGCGCACCGCCGGCGGCCCTGCCGCGCCCGAAGCCGTG
GTCGACCTGCACCCCGGCAGCGCCGCCCTGCCCTCCTACATCGAGCAGCTCGAGCGCAGCGCGATCCAGCGTGCACTGGA
AGAAAACCGCTGGAACAAGACCCGCACGGCCGCACAGCTGGGCATCACCTTCCGGGCGCTGCGCTACAAGCTGAAGAAGC
TGGGAATGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Response regulator receiver domain (Response_reg) (8-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.693	99.125	0.621
pilR	Acinetobacter baumannii strain A118	47.835	100	0.484