Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACI7YU_RS23510 | Genome accession | NZ_CP173722 |
| Coordinates | 5287751..5288272 (-) | Length | 173 a.a. |
| NCBI ID | WP_041477666.1 | Uniprot ID | A0A5E7PLF6 |
| Organism | Pseudomonas siliginis strain P | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5282751..5293272
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI7YU_RS23480 (ACI7YU_23490) | - | 5283080..5283661 (+) | 582 | WP_225914461.1 | YjfI family protein | - |
| ACI7YU_RS23485 (ACI7YU_23495) | - | 5283679..5284377 (+) | 699 | WP_041477670.1 | PspA/IM30 family protein | - |
| ACI7YU_RS23490 (ACI7YU_23500) | - | 5284586..5285236 (+) | 651 | WP_353188606.1 | DUF2491 family protein | - |
| ACI7YU_RS23495 (ACI7YU_23505) | - | 5285252..5285677 (+) | 426 | WP_016772952.1 | DUF350 domain-containing protein | - |
| ACI7YU_RS23500 (ACI7YU_23510) | - | 5285696..5286397 (+) | 702 | WP_252886878.1 | DUF1190 domain-containing protein | - |
| ACI7YU_RS23505 (ACI7YU_23515) | - | 5286399..5287556 (+) | 1158 | WP_236169660.1 | glutathionylspermidine synthase family protein | - |
| ACI7YU_RS23510 (ACI7YU_23520) | ssb | 5287751..5288272 (-) | 522 | WP_041477666.1 | single-stranded DNA-binding protein | Machinery gene |
| ACI7YU_RS23515 (ACI7YU_23525) | - | 5288282..5289679 (-) | 1398 | WP_041477665.1 | MFS transporter | - |
| ACI7YU_RS23520 (ACI7YU_23530) | uvrA | 5289871..5292705 (+) | 2835 | WP_041477664.1 | excinuclease ABC subunit UvrA | - |
| ACI7YU_RS23525 (ACI7YU_23535) | bfr | 5292772..5293239 (-) | 468 | WP_186631390.1 | bacterioferritin | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 19243.38 Da Isoelectric Point: 5.9314
>NTDB_id=1073842 ACI7YU_RS23510 WP_041477666.1 5287751..5288272(-) (ssb) [Pseudomonas siliginis strain P]
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQQGDQQGGGNNYQQQAPRQQAPRPQQSAPQQRSAPQAPQQAAPQP
APDFDSFDDDIPF
MARGVNKVILVGTCGQDPEVRYLPNGNAVTNLSLATSEQWTDKQTGQKVEKTEWHRVSMFGKVAEIAGEYLRKGSQVYIE
GKLQTREWEKDGIKRYTTEIVVDMQGTMQLLGGRPQQGDQQGGGNNYQQQAPRQQAPRPQQSAPQQRSAPQAPQQAAPQP
APDFDSFDDDIPF
Nucleotide
Download Length: 522 bp
>NTDB_id=1073842 ACI7YU_RS23510 WP_041477666.1 5287751..5288272(-) (ssb) [Pseudomonas siliginis strain P]
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGCACTTGCGGCCAGGATCCCGAAGTTCGCTACCTGCCTAACGGTAA
CGCCGTGACCAACCTGAGTCTGGCCACCAGCGAACAATGGACCGACAAGCAGACCGGTCAGAAGGTCGAAAAGACCGAGT
GGCACCGTGTGTCGATGTTCGGCAAGGTTGCCGAGATCGCCGGTGAATACCTGCGCAAGGGTTCGCAGGTCTACATCGAA
GGCAAGCTGCAGACCCGCGAGTGGGAAAAGGACGGCATCAAGCGTTACACCACTGAAATCGTGGTCGACATGCAAGGCAC
CATGCAACTGCTCGGCGGCCGTCCACAACAGGGCGACCAGCAAGGCGGCGGCAACAACTACCAGCAGCAGGCGCCACGTC
AGCAGGCACCGCGCCCGCAGCAGTCGGCTCCACAGCAGCGTTCGGCTCCGCAAGCACCGCAGCAGGCCGCACCGCAACCG
GCTCCGGATTTCGACAGCTTCGATGACGATATTCCGTTCTGA
ATGGCCCGTGGGGTTAACAAAGTCATATTGGTCGGCACTTGCGGCCAGGATCCCGAAGTTCGCTACCTGCCTAACGGTAA
CGCCGTGACCAACCTGAGTCTGGCCACCAGCGAACAATGGACCGACAAGCAGACCGGTCAGAAGGTCGAAAAGACCGAGT
GGCACCGTGTGTCGATGTTCGGCAAGGTTGCCGAGATCGCCGGTGAATACCTGCGCAAGGGTTCGCAGGTCTACATCGAA
GGCAAGCTGCAGACCCGCGAGTGGGAAAAGGACGGCATCAAGCGTTACACCACTGAAATCGTGGTCGACATGCAAGGCAC
CATGCAACTGCTCGGCGGCCGTCCACAACAGGGCGACCAGCAAGGCGGCGGCAACAACTACCAGCAGCAGGCGCCACGTC
AGCAGGCACCGCGCCCGCAGCAGTCGGCTCCACAGCAGCGTTCGGCTCCGCAAGCACCGCAGCAGGCCGCACCGCAACCG
GCTCCGGATTTCGACAGCTTCGATGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
58.47 |
100 |
0.618 |
| ssb | Glaesserella parasuis strain SC1401 |
48.066 |
100 |
0.503 |
| ssb | Neisseria meningitidis MC58 |
48.066 |
100 |
0.503 |
| ssb | Neisseria gonorrhoeae MS11 |
48.066 |
100 |
0.503 |