Detailed information NTG1073832

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACI7YU_RS19000
• Genome accession: NZ_CP173722
• Coordinates: 4299493..4301727 (-)
• Length: 744 a.a.
• NCBI ID: WP_406227157.1
• Uniprot ID: -
• Organism: Pseudomonas siliginis strain P
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4294493..4306727

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI7YU_RS18965 (ACI7YU_18975)	murB	4294871..4295890 (-)	1020	WP_406227153.1	UDP-N-acetylmuramate dehydrogenase	-
ACI7YU_RS18970 (ACI7YU_18980)	-	4295887..4296351 (-)	465	WP_076563814.1	low molecular weight protein-tyrosine-phosphatase	-
ACI7YU_RS18975 (ACI7YU_18985)	kdsB	4296351..4297115 (-)	765	WP_406227154.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACI7YU_RS18980 (ACI7YU_18990)	-	4297112..4297297 (-)	186	WP_003179363.1	Trm112 family protein	-
ACI7YU_RS18985 (ACI7YU_18995)	lpxK	4297321..4298331 (-)	1011	WP_406227155.1	tetraacyldisaccharide 4'-kinase	-
ACI7YU_RS18990 (ACI7YU_19000)	-	4298331..4298759 (-)	429	WP_041479458.1	biopolymer transporter ExbD	-
ACI7YU_RS18995 (ACI7YU_19005)	exbB	4298756..4299391 (-)	636	WP_016771007.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACI7YU_RS19000 (ACI7YU_19010)	comA	4299493..4301727 (-)	2235	WP_406227157.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACI7YU_RS19005 (ACI7YU_19015)	-	4301864..4302382 (+)	519	WP_039760200.1	DUF2062 domain-containing protein	-
ACI7YU_RS19010 (ACI7YU_19020)	-	4302522..4303301 (-)	780	WP_056788203.1	ABC transporter permease	-
ACI7YU_RS19015 (ACI7YU_19025)	-	4303298..4304230 (-)	933	WP_076563818.1	ABC transporter ATP-binding protein	-
ACI7YU_RS19020 (ACI7YU_19030)	-	4304364..4304987 (-)	624	WP_305381319.1	glutathione S-transferase family protein	-
ACI7YU_RS19025 (ACI7YU_19035)	-	4305031..4305690 (-)	660	WP_406227160.1	transglutaminase family protein	-

Sequence

Protein

• Length: 744 a.a.
• Molecular weight: 82124.26 Da
• Isoelectric Point: 9.6870

>NTDB_id=1073832 ACI7YU_RS19000 WP_406227157.1 4299493..4301727(-) (comA) [Pseudomonas siliginis strain P]
MRTGMMALAVGLLAPVFLPALPPVGWLLVLPMVALMLLPFRSYPLACLLFGFTWACFSAQWALNDRLPPSLDGETRWLEG
RVVGLPQHSDGVVRFELADARSRHEKLPSLLRLAWYAGPPVNSGERWRLAVKLKRPGGLLNPHAFDYEAWLLAQRIGATG
TIKDGQRLAEARYAWRDGVRQRLLAVDVQGREGALAALVLGDGSGLSREDWQVLQDTGTVHLLVISGQHIGLLAAVMYLL
VAGLARFGIWPVRWQWLPWACGLAFAAALGYGLLAGFDVPVQRACVMVTLVLLWRLRFRHLGAWWPLLLAFNGVLLFDPL
ASLRPGFWLSFAAVAVLIFTFGGRLGAWRWWQTWTRAQWLIAIGLCPVLLALSLPISVSGPVANLLAVPWVSLVVLPPAL
LGTLLLPVPYVGEGLLWLAGGLIDWLFIGLALIAGQWPAWIPAAIPWWALVLGSLGAILLLLPRGVPMRPLGWPLLLLLA
LPPQERIEEGRADVWQIDVGQGLAIFVRTRHHALLYDAGPRFGEFDLGERVVLPALRKLNVQALDLMLLSHADADHAGGA
RAVMRGLNVHRVVSGDPPNLPPELNAEACASGEQWQWDGVRFQLWQWSAADDSNQRSCVLQIEANGERLLLTGDIDIHAE
RVLLDSPLAVPTQWLQSPHHGSRSSSSMALLKALQPESVLISRGHGNSFGHPHPTVLARYRKQGLRIYDSAEQGAIHLQL
GSFKPPWTMRQQRRFWRDPPVPGR

Nucleotide

• Length: 2235 bp

>NTDB_id=1073832 ACI7YU_RS19000 WP_406227157.1 4299493..4301727(-) (comA) [Pseudomonas siliginis strain P]
ATGCGCACAGGGATGATGGCGCTGGCAGTCGGTCTGCTGGCCCCGGTTTTTTTGCCGGCCTTGCCGCCGGTCGGTTGGTT
GCTGGTGCTGCCAATGGTGGCGCTGATGTTGCTGCCGTTTCGCAGCTATCCATTGGCATGTTTGCTGTTTGGTTTCACGT
GGGCTTGTTTCAGTGCGCAGTGGGCGCTGAATGACCGCTTGCCACCGAGCCTGGACGGCGAAACCCGTTGGCTTGAAGGG
CGTGTGGTCGGCTTACCGCAGCACAGCGATGGCGTGGTGCGTTTCGAGCTGGCTGATGCGCGCTCACGCCACGAAAAACT
GCCATCGCTGCTGCGCCTGGCCTGGTACGCCGGGCCGCCGGTCAACAGCGGCGAACGCTGGCGACTGGCGGTGAAGTTGA
AGCGCCCGGGTGGCCTACTCAACCCGCACGCCTTCGACTACGAGGCCTGGCTGCTGGCGCAACGGATCGGCGCAACCGGC
ACGATCAAGGATGGTCAGCGCCTGGCTGAGGCCCGGTATGCATGGCGCGACGGCGTTCGCCAGCGCCTGCTGGCGGTGGA
TGTGCAAGGACGCGAGGGCGCGCTGGCGGCGCTGGTGCTCGGTGATGGCTCTGGGCTCAGTCGCGAGGATTGGCAGGTAC
TGCAAGACACCGGCACCGTGCATCTGCTGGTGATCTCCGGCCAGCACATCGGTTTGCTCGCCGCAGTGATGTATCTGCTG
GTTGCCGGGCTGGCGCGTTTCGGAATCTGGCCGGTGCGCTGGCAATGGTTGCCGTGGGCGTGTGGCCTGGCATTCGCGGC
GGCGTTGGGTTACGGCTTGCTCGCCGGGTTCGATGTGCCGGTGCAGCGCGCCTGCGTGATGGTGACGCTGGTGCTGCTGT
GGCGGCTGCGTTTTCGCCATCTCGGCGCGTGGTGGCCGTTATTGCTGGCGTTCAATGGCGTGCTGTTGTTCGATCCGCTG
GCCAGTTTGCGTCCGGGTTTCTGGCTGTCCTTCGCGGCGGTGGCAGTGTTGATCTTCACCTTCGGCGGTCGGCTGGGGGC
CTGGCGGTGGTGGCAGACCTGGACCCGCGCGCAGTGGCTGATCGCGATCGGCTTGTGTCCGGTGTTGCTGGCGTTGAGCT
TGCCCATCAGCGTCAGCGGGCCTGTAGCCAATCTGCTGGCCGTTCCGTGGGTCAGCCTCGTGGTGCTGCCGCCGGCATTG
CTCGGCACGCTATTGCTGCCCGTGCCTTATGTTGGCGAAGGACTGTTGTGGCTGGCCGGTGGTTTGATCGACTGGCTGTT
TATCGGGCTGGCGCTGATTGCCGGGCAATGGCCGGCGTGGATACCGGCCGCCATTCCATGGTGGGCTTTGGTCCTGGGCA
GCCTTGGCGCCATTTTATTGCTGTTGCCCCGTGGCGTGCCAATGCGTCCGTTGGGCTGGCCGCTGCTGTTGCTCTTGGCA
CTGCCGCCTCAAGAGCGAATAGAGGAAGGGCGAGCCGATGTCTGGCAAATCGACGTCGGCCAAGGCTTGGCGATTTTTGT
GCGCACGCGACATCACGCATTGCTCTATGACGCCGGCCCGCGTTTCGGCGAGTTCGATCTCGGCGAGCGAGTGGTATTGC
CAGCGTTACGTAAACTCAATGTGCAAGCGCTCGACTTGATGCTGCTCAGCCACGCTGACGCCGATCACGCTGGCGGCGCC
CGGGCGGTCATGCGTGGATTGAACGTGCACCGCGTGGTCAGCGGCGATCCGCCAAACCTGCCGCCGGAGCTGAACGCCGA
AGCCTGCGCAAGTGGCGAACAATGGCAGTGGGACGGCGTGCGGTTCCAGCTCTGGCAATGGTCGGCGGCCGATGACAGCA
ACCAGCGCTCCTGTGTATTGCAGATCGAAGCCAACGGTGAACGCCTGCTGCTCACCGGCGACATCGACATTCACGCCGAG
CGCGTTCTGCTCGACAGCCCGCTGGCCGTGCCGACGCAGTGGCTGCAATCGCCACATCACGGCAGTCGCAGTTCATCGTC
GATGGCGCTGTTGAAAGCCTTGCAGCCGGAATCAGTGCTGATCTCCCGCGGTCACGGCAACTCCTTCGGTCATCCGCATC
CCACCGTGCTGGCGCGCTACCGCAAGCAAGGTCTGCGCATCTACGACAGCGCCGAACAAGGTGCCATTCATTTGCAACTG
GGCAGCTTCAAGCCGCCGTGGACGATGCGGCAACAGCGGCGTTTCTGGCGCGATCCGCCGGTCCCGGGCCGTTGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-167)

• Competence protein (Competence) (198-464)

• Metallo-beta-lactamase superfamily (Lactamase_B) (498-685)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	62.587	96.64	0.605
comA	Ralstonia pseudosolanacearum GMI1000	34.961	100	0.366