Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiA   Type   Regulator
Locus tag   ACAM22_RS08400 Genome accession   NZ_AP028929
Coordinates   1825527..1827491 (-) Length   654 a.a.
NCBI ID   WP_369606677.1    Uniprot ID   A0AAT9G2C9
Organism   Streptococcus sp. SN-1     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 1820527..1832491
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS08380 (MASAN616_16290) rsmA 1820961..1821833 (-) 873 WP_261063494.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA -
  ACAM22_RS08385 (MASAN616_16300) rnmV 1821898..1822464 (-) 567 WP_261052336.1 ribonuclease M5 -
  ACAM22_RS08390 (MASAN616_16310) - 1822464..1823237 (-) 774 WP_261052333.1 TatD family hydrolase -
  ACAM22_RS08395 (MASAN616_16320) - 1823394..1825238 (+) 1845 WP_369606676.1 APC family permease -
  ACAM22_RS08400 (MASAN616_16330) amiA 1825527..1827491 (-) 1965 WP_369606677.1 peptide ABC transporter substrate-binding protein Regulator
  ACAM22_RS08405 (MASAN616_16340) rpmH 1827628..1827762 (-) 135 WP_000831905.1 50S ribosomal protein L34 -
  ACAM22_RS08410 (MASAN616_16350) - 1827907..1829121 (-) 1215 WP_000666455.1 pyridoxal phosphate-dependent aminotransferase -
  ACAM22_RS08415 (MASAN616_16360) - 1829278..1829571 (-) 294 WP_369606678.1 hypothetical protein -
  ACAM22_RS08420 (MASAN616_16370) - 1829733..1830185 (+) 453 WP_000079148.1 universal stress protein -
  ACAM22_RS08425 (MASAN616_16380) - 1830220..1831608 (-) 1389 WP_369606679.1 Cof-type HAD-IIB family hydrolase -

Sequence

Protein


Download         Length: 654 a.a.        Molecular weight: 73103.28 Da        Isoelectric Point: 4.7450

>NTDB_id=107352 ACAM22_RS08400 WP_369606677.1 1825527..1827491(-) (amiA) [Streptococcus sp. SN-1]
MKKSKVMLFGAMALTAGLALAACGSSQSSNADKTYSYIFVNNPDTLDYITSTRDSTSSITTNLIDGLLENDQYGNLIPSM
AESWTVSKDGLTYTYKIRQGAKWYTSEGEEYADVTAHDFVTGLKYAADKKAENLYLVQDSIKGLADYVEGKSSDFGTVGV
KAVDDYTLQYTLNQPETYWNSKTTASILSPVNEAFLKSQGDDFGSVTPSSILSNGPYLFKSFTSKSLIELDKNPNYWDKD
NVKIEKVKLSFFDGSDQDSIARGFLDGNYTDGRIFPTSSVFAELKKGNEDKITYTPQNSVTFYYLFNVNRQSYKQTMKQS
DKEKTDSRAAMQNKDFRQAINFAFDRHAYAAQTNGEDGADRILRNTVTPSNFVQVGDKNFGDIVNEKIVNYGKDWVNINL
NDGKQAFLNPEKAKEKFAKAKESLQAQGVTFPIHLDMPVDQTAKLDVQQAGSFKQTVEETLGKDNVVIDVIQLSPDEKDQ
ATYFADTAEQKDYDIDISGWGGDYSDPKTYLAILDPETGSQLKNMGLSEGKDKEVKDKIGLADYKKLLDQADAEIKDTQA
RYEKYAEAQAWLTDSALFLPVQSGGANPIFRKTVPFTGPFSFVGHKGNADNYKYVELQKEPVTAKQYQELYEKWLKEKAE
SNKKAQEDLVNHIQ

Nucleotide


Download         Length: 1965 bp        

>NTDB_id=107352 ACAM22_RS08400 WP_369606677.1 1825527..1827491(-) (amiA) [Streptococcus sp. SN-1]
ATGAAGAAATCAAAAGTGATGCTGTTTGGAGCTATGGCTTTGACAGCAGGTCTAGCTTTAGCAGCGTGTGGATCATCTCA
ATCAAGTAATGCAGACAAGACTTACTCTTATATCTTTGTCAATAACCCAGATACCTTGGATTATATTACCTCTACACGAG
ACTCTACATCTAGTATCACAACCAACTTGATTGATGGTTTGTTGGAAAACGACCAGTATGGCAATCTCATTCCCTCTATG
GCTGAGTCATGGACGGTGTCAAAAGATGGATTGACCTACACTTATAAAATCCGTCAGGGGGCTAAATGGTACACTTCTGA
AGGAGAAGAGTATGCAGATGTAACCGCTCATGACTTTGTGACAGGTCTTAAGTATGCGGCTGATAAAAAGGCTGAAAACT
TGTACTTGGTACAAGACTCTATCAAGGGTCTAGCAGATTATGTTGAAGGGAAATCATCTGATTTTGGTACTGTTGGTGTT
AAGGCAGTGGATGATTACACTCTACAATACACTCTCAACCAACCTGAAACTTATTGGAACTCTAAAACAACAGCAAGTAT
CCTTAGTCCTGTAAATGAAGCCTTCTTGAAGTCTCAGGGAGATGACTTTGGAAGTGTGACACCATCAAGTATCTTGTCAA
ATGGTCCTTACTTGTTTAAATCCTTCACATCCAAATCTTTGATTGAACTTGACAAAAACCCTAATTACTGGGATAAGGAT
AATGTTAAAATCGAGAAAGTGAAACTCTCTTTCTTTGACGGTTCTGACCAAGACAGCATTGCTAGAGGTTTCTTGGATGG
TAACTATACTGATGGCCGTATCTTCCCAACAAGTTCAGTATTTGCTGAACTCAAGAAGGGCAATGAGGACAAGATTACCT
ACACACCACAAAACTCAGTGACTTTCTATTATCTTTTCAACGTTAATCGTCAAAGCTACAAGCAGACGATGAAACAGTCT
GATAAGGAAAAGACAGATTCACGCGCAGCTATGCAGAATAAAGATTTCCGTCAGGCTATCAACTTTGCCTTTGACCGTCA
TGCTTATGCAGCACAGACAAATGGTGAAGATGGAGCAGACCGTATCTTGCGTAACACAGTTACACCAAGTAACTTTGTCC
AAGTTGGGGATAAGAACTTTGGTGATATTGTCAATGAAAAAATTGTCAACTACGGTAAAGATTGGGTAAATATCAACCTA
AACGATGGTAAGCAAGCCTTCTTGAATCCTGAAAAGGCCAAAGAGAAGTTTGCCAAGGCCAAAGAAAGTCTGCAAGCACA
GGGAGTAACTTTCCCAATTCATTTGGATATGCCAGTTGACCAGACTGCTAAGTTGGATGTGCAACAGGCTGGATCGTTCA
AACAAACAGTGGAAGAAACTCTTGGTAAGGATAATGTAGTCATTGATGTTATCCAACTTTCTCCAGATGAAAAAGATCAG
GCAACCTACTTTGCAGATACAGCAGAACAAAAAGACTACGATATCGACATCTCAGGATGGGGTGGAGATTACTCAGATCC
TAAGACTTACCTAGCGATCCTTGATCCAGAGACAGGTTCTCAGTTGAAAAACATGGGCTTGTCTGAAGGAAAAGACAAGG
AAGTTAAGGACAAGATTGGTCTTGCTGACTACAAGAAACTCTTGGATCAGGCAGACGCAGAAATTAAAGATACTCAAGCC
CGCTATGAAAAATATGCTGAAGCCCAAGCTTGGTTGACAGATAGCGCCTTGTTCCTACCGGTTCAAAGTGGTGGAGCTAA
TCCAATCTTCCGTAAGACTGTACCGTTTACAGGACCATTCTCATTCGTTGGTCATAAGGGAAATGCGGACAACTACAAAT
ATGTTGAATTGCAAAAAGAGCCAGTAACTGCTAAACAGTACCAAGAACTCTACGAAAAATGGCTAAAAGAAAAAGCTGAG
TCAAATAAAAAAGCTCAGGAAGATTTAGTTAACCACATTCAATGA

Domains

Predicted by InterproScan.

Bacterial extracellular solute-binding proteins, family 5 Middle (SBP_bac_5)

(76-515)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiA Streptococcus salivarius strain HSISS4

55.319

100

0.557
  amiA3 Streptococcus thermophilus LMD-9

54.863

100

0.552
  amiA3 Streptococcus thermophilus LMG 18311

54.559

100

0.549

Multiple sequence alignment