Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   ACAM22_RS07395 Genome accession   NZ_AP028929
Coordinates   1650636..1651295 (+) Length   219 a.a.
NCBI ID   WP_369606625.1    Uniprot ID   A0AAT9G1W1
Organism   Streptococcus sp. SN-1     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1645636..1656295
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS07375 (MASAN616_14490) - 1645730..1646818 (-) 1089 WP_033681461.1 AI-2E family transporter -
  ACAM22_RS07380 (MASAN616_14500) - 1646828..1648117 (-) 1290 WP_369606623.1 DUF308 domain-containing protein -
  ACAM22_RS07385 (MASAN616_14510) - 1648918..1650063 (+) 1146 WP_049499291.1 low temperature requirement protein A -
  ACAM22_RS07390 (MASAN616_14520) - 1650111..1650566 (-) 456 WP_369606624.1 GNAT family N-acetyltransferase -
  ACAM22_RS07395 (MASAN616_14530) cclA/cilC 1650636..1651295 (+) 660 WP_369606625.1 A24 family peptidase Machinery gene
  ACAM22_RS07400 (MASAN616_14540) trpA 1651267..1652043 (-) 777 WP_369606626.1 tryptophan synthase subunit alpha -
  ACAM22_RS07405 (MASAN616_14550) trpB 1652036..1653259 (-) 1224 WP_261149242.1 tryptophan synthase subunit beta -
  ACAM22_RS07410 (MASAN616_14560) - 1653237..1653836 (-) 600 WP_369606627.1 phosphoribosylanthranilate isomerase -
  ACAM22_RS07415 (MASAN616_14570) trpC 1653823..1654590 (-) 768 WP_369606628.1 indole-3-glycerol phosphate synthase TrpC -
  ACAM22_RS07420 (MASAN616_14580) trpD 1654587..1655591 (-) 1005 WP_369606629.1 anthranilate phosphoribosyltransferase -
  ACAM22_RS07425 (MASAN616_14590) - 1655602..1656168 (-) 567 WP_000601904.1 aminodeoxychorismate/anthranilate synthase component II -

Sequence

Protein


Download         Length: 219 a.a.        Molecular weight: 24889.06 Da        Isoelectric Point: 7.2567

>NTDB_id=107340 ACAM22_RS07395 WP_369606625.1 1650636..1651295(+) (cclA/cilC) [Streptococcus sp. SN-1]
MIDIYFFLVGSILASFLGLVIDRFPEQSIIQPASHCDSCQTRLCTLDLIPILSQVFNRFHCRYCKSPYPFWYALFELGLG
LLFLAWSWGLLSLGQVILITTGLTLGIYDLRHQEYPLLVWIVFHLLLMVWSSWNLVMVFFLVLGILAHFIDIRMGAGDFL
FLASCALVFSATELLILIQFASATGILSFLLQKKKERLPFVPFLLLAACVIIFGKLLLV

Nucleotide


Download         Length: 660 bp        

>NTDB_id=107340 ACAM22_RS07395 WP_369606625.1 1650636..1651295(+) (cclA/cilC) [Streptococcus sp. SN-1]
ATGATTGATATTTATTTTTTTCTTGTCGGGAGCATTCTCGCTTCCTTTCTTGGTTTGGTCATTGACCGTTTTCCAGAGCA
ATCCATTATCCAACCTGCTAGTCACTGCGATTCCTGTCAGACTCGCTTGTGCACCTTAGATTTGATTCCGATTCTGTCAC
AGGTCTTCAATCGCTTTCACTGTCGCTACTGCAAGTCTCCTTATCCCTTCTGGTATGCCCTTTTTGAACTAGGTTTAGGC
CTCCTCTTTCTGGCTTGGTCTTGGGGATTACTTTCCTTGGGACAAGTCATCCTAATCACCACTGGTTTGACCTTAGGCAT
CTACGATTTGCGCCATCAGGAATACCCCTTACTGGTCTGGATTGTCTTTCATCTACTCCTAATGGTCTGGTCTAGCTGGA
ATCTGGTCATGGTCTTCTTCCTTGTTCTCGGAATTTTGGCTCATTTTATCGATATCCGCATGGGTGCAGGAGATTTCCTC
TTTCTGGCTTCTTGTGCCCTCGTCTTTAGCGCAACCGAATTACTCATCTTGATTCAGTTTGCTTCTGCTACGGGGATTCT
TTCCTTTCTCCTGCAAAAGAAAAAGGAAAGACTTCCTTTCGTGCCTTTCCTCTTGCTCGCTGCTTGTGTGATTATTTTTG
GTAAGCTACTGCTTGTTTGA

Domains

Predicted by InterproScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-88)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

89.954

100

0.9
  cclA/cilC Streptococcus pneumoniae Rx1

88.128

100

0.881
  cclA/cilC Streptococcus pneumoniae D39

88.128

100

0.881
  cclA/cilC Streptococcus pneumoniae R6

88.128

100

0.881
  cclA/cilC Streptococcus mitis NCTC 12261

85.845

100

0.858
  cclA/cilC Streptococcus pneumoniae TIGR4

85.388

100

0.854

Multiple sequence alignment