Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   ACAM22_RS01130 Genome accession   NZ_AP028929
Coordinates   242968..243588 (+) Length   206 a.a.
NCBI ID   WP_049520987.1    Uniprot ID   A0AAT9FYN3
Organism   Streptococcus sp. SN-1     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 237968..248588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACAM22_RS01120 (MASAN616_02200) rpoC 238424..242101 (+) 3678 WP_000228746.1 DNA-directed RNA polymerase subunit beta' -
  ACAM22_RS01125 (MASAN616_02210) ndk 242209..242622 (+) 414 WP_261053461.1 nucleoside-diphosphate kinase -
  ACAM22_RS01130 (MASAN616_02220) comM 242968..243588 (+) 621 WP_049520987.1 hypothetical protein Regulator
  ACAM22_RS01135 (MASAN616_02230) tsaE 243673..244116 (+) 444 WP_261053473.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACAM22_RS01140 (MASAN616_02240) - 244106..244624 (+) 519 WP_261053474.1 GNAT family N-acetyltransferase -
  ACAM22_RS01145 (MASAN616_02250) - 244632..245648 (+) 1017 WP_261053475.1 LCP family protein -
  ACAM22_RS01150 (MASAN616_02260) cinA 245735..246991 (+) 1257 WP_261053476.1 competence/damage-inducible protein A Machinery gene
  ACAM22_RS01155 (MASAN616_02270) recA 247046..248212 (+) 1167 WP_084890945.1 recombinase RecA Machinery gene

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23522.66 Da        Isoelectric Point: 10.0254

>NTDB_id=107307 ACAM22_RS01130 WP_049520987.1 242968..243588(+) (comM) [Streptococcus sp. SN-1]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKQSVKLFYSILLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYMRDLLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLMYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIATLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=107307 ACAM22_RS01130 WP_049520987.1 242968..243588(+) (comM) [Streptococcus sp. SN-1]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCCTATGGAAAGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGTATGGTCTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGCAGTCAGTGAAGCTTTTTTACAGTATCCTGCTCTTA
ATTAATTTGTTAGGAGCTGTCCTTGTTTTGTCAGACAACTTGTTCATCAAAAATACGTTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGACTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACATGCGCGATTTGC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTAGTGACTATTTTAGCAACACTTCTCTTCTTAAGAAATCCAATGACTATT
GTCTCACTTCTGATGTATATTGGACTGGGTTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGCTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

97.087

100

0.971
  comM Streptococcus pneumoniae R6

97.087

100

0.971
  comM Streptococcus pneumoniae TIGR4

97.087

100

0.971
  comM Streptococcus mitis SK321

38.462

94.66

0.364

Multiple sequence alignment