Detailed information
Bioinformatically predicted
Overview
| Name | qstR | Type | Regulator |
| Locus tag | ACI3L8_RS09105 | Genome accession | NZ_CP173391 |
| Coordinates | 2003266..2003910 (-) | Length | 214 a.a. |
| NCBI ID | WP_005432827.1 | Uniprot ID | - |
| Organism | Vibrio campbellii strain LB3 | ||
| Function | promote expression of competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1998266..2008910
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI3L8_RS09095 (ACI3L8_09095) | uvrA | 1999268..2002090 (-) | 2823 | WP_077200162.1 | excinuclease ABC subunit UvrA | - |
| ACI3L8_RS09100 (ACI3L8_09100) | galU | 2002229..2003101 (-) | 873 | WP_005432802.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ACI3L8_RS09105 (ACI3L8_09105) | qstR | 2003266..2003910 (-) | 645 | WP_005432827.1 | LuxR C-terminal-related transcriptional regulator | Regulator |
| ACI3L8_RS09110 (ACI3L8_09110) | ssb | 2004204..2004740 (+) | 537 | WP_005432828.1 | single-stranded DNA-binding protein | Machinery gene |
| ACI3L8_RS09115 (ACI3L8_09115) | csrD | 2004988..2006997 (+) | 2010 | WP_086368946.1 | RNase E specificity factor CsrD | - |
| ACI3L8_RS09120 (ACI3L8_09120) | - | 2007009..2008457 (+) | 1449 | WP_086368947.1 | MSHA biogenesis protein MshI | - |
Sequence
Protein
Download Length: 214 a.a. Molecular weight: 24551.46 Da Isoelectric Point: 8.0591
>NTDB_id=1072020 ACI3L8_RS09105 WP_005432827.1 2003266..2003910(-) (qstR) [Vibrio campbellii strain LB3]
MKKSAYARKLFLISMEEDAGKKVEALEKYTDIDIPVISTQALMEANPKHRNKILLIDFSEHKELVLSIKNLPLIWKNFET
VVFNVPKRLTTDELLAFGQLKGIFYEESSLEQIGEGLKEIINGQNWLPRNVTSQLLHYYRNVISTHTAPATVDLTIRELQ
VLRCLQAGASNNQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
MKKSAYARKLFLISMEEDAGKKVEALEKYTDIDIPVISTQALMEANPKHRNKILLIDFSEHKELVLSIKNLPLIWKNFET
VVFNVPKRLTTDELLAFGQLKGIFYEESSLEQIGEGLKEIINGQNWLPRNVTSQLLHYYRNVISTHTAPATVDLTIRELQ
VLRCLQAGASNNQMAEELFVSEFTIKSHLYQIFKKLSVKNRVQAIAWADQNLMS
Nucleotide
Download Length: 645 bp
>NTDB_id=1072020 ACI3L8_RS09105 WP_005432827.1 2003266..2003910(-) (qstR) [Vibrio campbellii strain LB3]
GTGAAAAAATCGGCTTATGCGAGAAAACTTTTTCTAATCAGCATGGAAGAGGATGCAGGGAAAAAGGTCGAAGCTCTGGA
GAAGTATACAGATATCGACATCCCCGTCATTTCGACCCAAGCACTGATGGAAGCAAACCCGAAGCACCGCAATAAAATCT
TGCTTATCGACTTCAGTGAACACAAAGAGTTGGTTCTATCAATAAAAAACCTTCCTCTGATTTGGAAGAATTTCGAAACA
GTCGTGTTCAACGTTCCTAAACGTTTGACGACAGATGAGCTATTGGCGTTTGGTCAATTGAAAGGCATCTTCTATGAAGA
GAGTTCTCTTGAGCAGATTGGCGAAGGGTTAAAGGAAATCATTAATGGTCAAAACTGGCTGCCTCGTAATGTCACCAGTC
AACTTCTCCATTATTATCGTAACGTCATTAGTACCCACACAGCTCCTGCCACCGTCGATTTGACCATTCGTGAACTGCAA
GTACTTCGCTGCCTGCAAGCTGGCGCATCAAACAATCAAATGGCCGAAGAGTTATTCGTGAGCGAATTCACTATCAAGTC
TCACCTGTATCAGATTTTTAAGAAGCTTTCGGTCAAAAACCGTGTACAAGCGATTGCTTGGGCTGACCAAAACCTGATGT
CATAA
GTGAAAAAATCGGCTTATGCGAGAAAACTTTTTCTAATCAGCATGGAAGAGGATGCAGGGAAAAAGGTCGAAGCTCTGGA
GAAGTATACAGATATCGACATCCCCGTCATTTCGACCCAAGCACTGATGGAAGCAAACCCGAAGCACCGCAATAAAATCT
TGCTTATCGACTTCAGTGAACACAAAGAGTTGGTTCTATCAATAAAAAACCTTCCTCTGATTTGGAAGAATTTCGAAACA
GTCGTGTTCAACGTTCCTAAACGTTTGACGACAGATGAGCTATTGGCGTTTGGTCAATTGAAAGGCATCTTCTATGAAGA
GAGTTCTCTTGAGCAGATTGGCGAAGGGTTAAAGGAAATCATTAATGGTCAAAACTGGCTGCCTCGTAATGTCACCAGTC
AACTTCTCCATTATTATCGTAACGTCATTAGTACCCACACAGCTCCTGCCACCGTCGATTTGACCATTCGTGAACTGCAA
GTACTTCGCTGCCTGCAAGCTGGCGCATCAAACAATCAAATGGCCGAAGAGTTATTCGTGAGCGAATTCACTATCAAGTC
TCACCTGTATCAGATTTTTAAGAAGCTTTCGGTCAAAAACCGTGTACAAGCGATTGCTTGGGCTGACCAAAACCTGATGT
CATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| qstR | Vibrio campbellii strain DS40M4 |
100 |
100 |
1 |
| qstR | Vibrio parahaemolyticus RIMD 2210633 |
89.252 |
100 |
0.893 |
| qstR | Vibrio cholerae strain A1552 |
52.336 |
100 |
0.523 |