Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | ACI3L5_RS15505 | Genome accession | NZ_CP173389 |
| Coordinates | 3396740..3397333 (-) | Length | 197 a.a. |
| NCBI ID | WP_005432718.1 | Uniprot ID | A0A812GEL0 |
| Organism | Vibrio campbellii strain LB10 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3391740..3402333
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI3L5_RS15485 (ACI3L5_15485) | aroB | 3392619..3393719 (-) | 1101 | WP_045380637.1 | 3-dehydroquinate synthase | - |
| ACI3L5_RS15490 (ACI3L5_15490) | aroK | 3393751..3394269 (-) | 519 | WP_010443904.1 | shikimate kinase AroK | - |
| ACI3L5_RS15495 (ACI3L5_15495) | pilQ | 3394458..3396200 (-) | 1743 | WP_050906101.1 | type IV pilus secretin PilQ | Machinery gene |
| ACI3L5_RS15500 (ACI3L5_15500) | pilP | 3396235..3396750 (-) | 516 | WP_005432702.1 | pilus assembly protein PilP | Machinery gene |
| ACI3L5_RS15505 (ACI3L5_15505) | pilO | 3396740..3397333 (-) | 594 | WP_005432718.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACI3L5_RS15510 (ACI3L5_15510) | pilN | 3397326..3397901 (-) | 576 | WP_005432710.1 | PilN domain-containing protein | Machinery gene |
| ACI3L5_RS15515 (ACI3L5_15515) | pilM | 3397885..3398901 (-) | 1017 | WP_404973299.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| ACI3L5_RS15520 (ACI3L5_15520) | - | 3399080..3401647 (+) | 2568 | WP_404973300.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 23002.49 Da Isoelectric Point: 4.8135
>NTDB_id=1071985 ACI3L5_RS15505 WP_005432718.1 3396740..3397333(-) (pilO) [Vibrio campbellii strain LB10]
MVNWQDLEMDEIAEWPLVPQLVAILLMVVLIQGFGYWFYLKPEEARLNTLIQEEQTLKVALRIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGDKESEHFLYRLPLNIELTGDFHDIGRFSQAIATLPRII
TFQDVTWQRVSQESETLHFRVRANTYQFKPEEKKDAK
MVNWQDLEMDEIAEWPLVPQLVAILLMVVLIQGFGYWFYLKPEEARLNTLIQEEQTLKVALRIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGDKESEHFLYRLPLNIELTGDFHDIGRFSQAIATLPRII
TFQDVTWQRVSQESETLHFRVRANTYQFKPEEKKDAK
Nucleotide
Download Length: 594 bp
>NTDB_id=1071985 ACI3L5_RS15505 WP_005432718.1 3396740..3397333(-) (pilO) [Vibrio campbellii strain LB10]
ATGGTTAATTGGCAAGACCTAGAAATGGATGAAATCGCTGAGTGGCCGCTGGTACCTCAGTTGGTGGCGATTCTTCTTAT
GGTGGTGTTGATCCAAGGTTTTGGTTACTGGTTTTATTTGAAGCCAGAGGAAGCTCGCCTTAATACCTTGATCCAAGAAG
AGCAGACTTTAAAAGTCGCGCTGAGGATCAAAGCCAATAAAGTCGCTGCACTGCCGCAGCTTCAGTCACAACTTGATGAA
CTGACCACCCGCTATGAACTGCTTTTGCAACAACTGCCGGCACAGAAAGAATTGGCGACCATGCTAGCGTCGGTTAATGA
ACTCGGCATCGATAACAAGCTGACATTTACGCGTATTGATTGGGGAGATAAAGAGTCAGAGCACTTCCTTTACCGTTTGC
CGCTCAATATTGAGCTAACGGGTGACTTCCATGACATCGGTCGTTTTTCACAGGCCATCGCCACCTTACCACGCATCATC
ACATTTCAAGATGTAACTTGGCAGCGAGTCAGTCAAGAGAGTGAAACCTTGCACTTCCGTGTAAGAGCAAACACTTACCA
ATTCAAACCAGAGGAAAAGAAAGATGCGAAATAA
ATGGTTAATTGGCAAGACCTAGAAATGGATGAAATCGCTGAGTGGCCGCTGGTACCTCAGTTGGTGGCGATTCTTCTTAT
GGTGGTGTTGATCCAAGGTTTTGGTTACTGGTTTTATTTGAAGCCAGAGGAAGCTCGCCTTAATACCTTGATCCAAGAAG
AGCAGACTTTAAAAGTCGCGCTGAGGATCAAAGCCAATAAAGTCGCTGCACTGCCGCAGCTTCAGTCACAACTTGATGAA
CTGACCACCCGCTATGAACTGCTTTTGCAACAACTGCCGGCACAGAAAGAATTGGCGACCATGCTAGCGTCGGTTAATGA
ACTCGGCATCGATAACAAGCTGACATTTACGCGTATTGATTGGGGAGATAAAGAGTCAGAGCACTTCCTTTACCGTTTGC
CGCTCAATATTGAGCTAACGGGTGACTTCCATGACATCGGTCGTTTTTCACAGGCCATCGCCACCTTACCACGCATCATC
ACATTTCAAGATGTAACTTGGCAGCGAGTCAGTCAAGAGAGTGAAACCTTGCACTTCCGTGTAAGAGCAAACACTTACCA
ATTCAAACCAGAGGAAAAGAAAGATGCGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
99.474 |
96.447 |
0.959 |
| pilO | Vibrio cholerae strain A1552 |
72.251 |
96.954 |
0.701 |