Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | ACI3L6_RS12355 | Genome accession | NZ_CP173383 |
| Coordinates | 2776811..2777404 (-) | Length | 197 a.a. |
| NCBI ID | WP_005432718.1 | Uniprot ID | A0A812GEL0 |
| Organism | Vibrio campbellii strain LB314 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2771811..2782404
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACI3L6_RS12335 (ACI3L6_12335) | aroB | 2772690..2773790 (-) | 1101 | WP_045380637.1 | 3-dehydroquinate synthase | - |
| ACI3L6_RS12340 (ACI3L6_12340) | aroK | 2773822..2774340 (-) | 519 | WP_010443904.1 | shikimate kinase AroK | - |
| ACI3L6_RS12345 (ACI3L6_12345) | pilQ | 2774529..2776271 (-) | 1743 | WP_050906101.1 | type IV pilus secretin PilQ | Machinery gene |
| ACI3L6_RS12350 (ACI3L6_12350) | pilP | 2776306..2776821 (-) | 516 | WP_005432702.1 | pilus assembly protein PilP | Machinery gene |
| ACI3L6_RS12355 (ACI3L6_12355) | pilO | 2776811..2777404 (-) | 594 | WP_005432718.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| ACI3L6_RS12360 (ACI3L6_12360) | pilN | 2777397..2777972 (-) | 576 | WP_005432710.1 | PilN domain-containing protein | Machinery gene |
| ACI3L6_RS12365 (ACI3L6_12365) | pilM | 2777956..2778972 (-) | 1017 | WP_005432712.1 | type IV pilus biogenesis protein PilM | Machinery gene |
| ACI3L6_RS12370 (ACI3L6_12370) | - | 2779151..2781718 (+) | 2568 | WP_047482703.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 197 a.a. Molecular weight: 23002.49 Da Isoelectric Point: 4.8135
>NTDB_id=1071828 ACI3L6_RS12355 WP_005432718.1 2776811..2777404(-) (pilO) [Vibrio campbellii strain LB314]
MVNWQDLEMDEIAEWPLVPQLVAILLMVVLIQGFGYWFYLKPEEARLNTLIQEEQTLKVALRIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGDKESEHFLYRLPLNIELTGDFHDIGRFSQAIATLPRII
TFQDVTWQRVSQESETLHFRVRANTYQFKPEEKKDAK
MVNWQDLEMDEIAEWPLVPQLVAILLMVVLIQGFGYWFYLKPEEARLNTLIQEEQTLKVALRIKANKVAALPQLQSQLDE
LTTRYELLLQQLPAQKELATMLASVNELGIDNKLTFTRIDWGDKESEHFLYRLPLNIELTGDFHDIGRFSQAIATLPRII
TFQDVTWQRVSQESETLHFRVRANTYQFKPEEKKDAK
Nucleotide
Download Length: 594 bp
>NTDB_id=1071828 ACI3L6_RS12355 WP_005432718.1 2776811..2777404(-) (pilO) [Vibrio campbellii strain LB314]
ATGGTTAATTGGCAAGACCTAGAAATGGATGAAATCGCTGAGTGGCCGCTGGTACCTCAGTTGGTGGCGATTCTTCTTAT
GGTGGTGTTGATCCAAGGTTTTGGTTACTGGTTTTATTTGAAGCCAGAGGAAGCTCGCCTTAATACCTTGATCCAAGAAG
AGCAGACTTTAAAAGTCGCGCTGAGGATCAAAGCCAATAAAGTCGCTGCACTGCCGCAGCTTCAGTCACAACTTGATGAA
CTGACCACCCGCTATGAACTGCTTTTGCAACAACTGCCGGCACAGAAAGAATTGGCGACCATGCTAGCGTCGGTTAATGA
ACTCGGCATCGATAACAAGCTGACATTTACGCGTATTGATTGGGGAGATAAAGAGTCAGAGCACTTCCTTTACCGTTTGC
CGCTCAATATTGAGCTAACGGGTGACTTCCATGACATCGGTCGTTTTTCACAGGCCATCGCCACCTTACCACGCATCATC
ACATTTCAAGATGTAACTTGGCAGCGAGTCAGTCAAGAGAGTGAAACCTTGCACTTCCGTGTAAGAGCAAACACTTACCA
ATTCAAACCAGAGGAAAAGAAAGATGCGAAATAA
ATGGTTAATTGGCAAGACCTAGAAATGGATGAAATCGCTGAGTGGCCGCTGGTACCTCAGTTGGTGGCGATTCTTCTTAT
GGTGGTGTTGATCCAAGGTTTTGGTTACTGGTTTTATTTGAAGCCAGAGGAAGCTCGCCTTAATACCTTGATCCAAGAAG
AGCAGACTTTAAAAGTCGCGCTGAGGATCAAAGCCAATAAAGTCGCTGCACTGCCGCAGCTTCAGTCACAACTTGATGAA
CTGACCACCCGCTATGAACTGCTTTTGCAACAACTGCCGGCACAGAAAGAATTGGCGACCATGCTAGCGTCGGTTAATGA
ACTCGGCATCGATAACAAGCTGACATTTACGCGTATTGATTGGGGAGATAAAGAGTCAGAGCACTTCCTTTACCGTTTGC
CGCTCAATATTGAGCTAACGGGTGACTTCCATGACATCGGTCGTTTTTCACAGGCCATCGCCACCTTACCACGCATCATC
ACATTTCAAGATGTAACTTGGCAGCGAGTCAGTCAAGAGAGTGAAACCTTGCACTTCCGTGTAAGAGCAAACACTTACCA
ATTCAAACCAGAGGAAAAGAAAGATGCGAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Vibrio campbellii strain DS40M4 |
99.474 |
96.447 |
0.959 |
| pilO | Vibrio cholerae strain A1552 |
72.251 |
96.954 |
0.701 |