Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | ACIO07_RS05965 | Genome accession | NZ_CP173228 |
| Coordinates | 1153536..1153892 (-) | Length | 118 a.a. |
| NCBI ID | WP_017805052.1 | Uniprot ID | A0A0F5EZA2 |
| Organism | Avibacterium paragallinarum strain npAP/GA-USA/20231220/S2-3 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1148536..1158892
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACIO07_RS05930 (ACIO07_05935) | - | 1148668..1149045 (-) | 378 | WP_017805060.1 | hypothetical protein | - |
| ACIO07_RS05935 (ACIO07_05940) | - | 1149188..1149790 (+) | 603 | WP_410683390.1 | beta-phosphoglucomutase family hydrolase | - |
| ACIO07_RS05940 (ACIO07_05945) | - | 1149791..1150399 (+) | 609 | WP_410683391.1 | sugar O-acetyltransferase | - |
| ACIO07_RS05945 (ACIO07_05950) | - | 1150392..1150850 (+) | 459 | WP_110479107.1 | YqaA family protein | - |
| ACIO07_RS05950 (ACIO07_05955) | luxS | 1151074..1151580 (+) | 507 | WP_035685396.1 | S-ribosylhomocysteine lyase | - |
| ACIO07_RS05955 (ACIO07_05960) | hemW | 1151648..1152802 (-) | 1155 | WP_046098006.1 | radical SAM family heme chaperone HemW | - |
| ACIO07_RS05960 (ACIO07_05965) | rdgB | 1152802..1153398 (-) | 597 | WP_035685390.1 | RdgB/HAM1 family non-canonical purine NTP pyrophosphatase | - |
| ACIO07_RS05965 (ACIO07_05970) | comE1/comEA | 1153536..1153892 (-) | 357 | WP_017805052.1 | ComEA family DNA-binding protein | Machinery gene |
| ACIO07_RS05970 (ACIO07_05975) | - | 1154154..1155467 (-) | 1314 | WP_110479111.1 | NCS2 family permease | - |
| ACIO07_RS05975 (ACIO07_05980) | - | 1155498..1155638 (+) | 141 | WP_156127777.1 | hypothetical protein | - |
| ACIO07_RS05980 (ACIO07_05985) | galE | 1155674..1156690 (+) | 1017 | WP_410683393.1 | UDP-glucose 4-epimerase GalE | - |
| ACIO07_RS05985 (ACIO07_05990) | - | 1156757..1158025 (+) | 1269 | WP_410683394.1 | AmpG family muropeptide MFS transporter | - |
Sequence
Protein
Download Length: 118 a.a. Molecular weight: 12840.71 Da Isoelectric Point: 7.0137
>NTDB_id=1070914 ACIO07_RS05965 WP_017805052.1 1153536..1153892(-) (comE1/comEA) [Avibacterium paragallinarum strain npAP/GA-USA/20231220/S2-3]
MKIKTILSSLILAITFIGSVYADETVNPPATTQVTDNKTIDTTFIGEKLNINTASASEIQKALVGIGAKKAEAIVEYREQ
HGKFIAPEQLLEVKGIGKAIFEKNKDRIDLSSFNSNSQ
MKIKTILSSLILAITFIGSVYADETVNPPATTQVTDNKTIDTTFIGEKLNINTASASEIQKALVGIGAKKAEAIVEYREQ
HGKFIAPEQLLEVKGIGKAIFEKNKDRIDLSSFNSNSQ
Nucleotide
Download Length: 357 bp
>NTDB_id=1070914 ACIO07_RS05965 WP_017805052.1 1153536..1153892(-) (comE1/comEA) [Avibacterium paragallinarum strain npAP/GA-USA/20231220/S2-3]
ATGAAAATTAAAACGATTTTATCTTCTCTCATTTTGGCAATAACATTTATTGGTTCGGTTTATGCTGATGAAACAGTGAA
TCCACCAGCCACGACACAAGTGACGGATAATAAAACTATCGACACCACATTTATTGGCGAAAAGCTCAATATTAATACGG
CAAGTGCAAGTGAAATTCAGAAAGCCTTAGTAGGCATTGGGGCGAAGAAAGCAGAAGCTATCGTGGAATATCGAGAACAA
CACGGTAAATTTATCGCACCAGAACAACTATTAGAAGTAAAGGGGATTGGAAAAGCGATTTTTGAAAAAAATAAAGATCG
CATAGATTTATCTTCATTTAATAGTAATAGCCAATAG
ATGAAAATTAAAACGATTTTATCTTCTCTCATTTTGGCAATAACATTTATTGGTTCGGTTTATGCTGATGAAACAGTGAA
TCCACCAGCCACGACACAAGTGACGGATAATAAAACTATCGACACCACATTTATTGGCGAAAAGCTCAATATTAATACGG
CAAGTGCAAGTGAAATTCAGAAAGCCTTAGTAGGCATTGGGGCGAAGAAAGCAGAAGCTATCGTGGAATATCGAGAACAA
CACGGTAAATTTATCGCACCAGAACAACTATTAGAAGTAAAGGGGATTGGAAAAGCGATTTTTGAAAAAAATAAAGATCG
CATAGATTTATCTTCATTTAATAGTAATAGCCAATAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
52.679 |
94.915 |
0.5 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
50 |
89.831 |
0.449 |
| comEA | Vibrio cholerae C6706 |
41.441 |
94.068 |
0.39 |
| comEA | Vibrio cholerae strain A1552 |
41.441 |
94.068 |
0.39 |