Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | ACH59B_RS25425 | Genome accession | NZ_CP173059 |
| Coordinates | 5747156..5747647 (-) | Length | 163 a.a. |
| NCBI ID | WP_010346813.1 | Uniprot ID | A0A3G8R109 |
| Organism | MAG: Paenibacillus sp. DP01 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 5742156..5752647
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACH59B_RS25405 | opp4C | 5742628..5743551 (-) | 924 | WP_016822456.1 | oligopeptide ABC transporter permease | - |
| ACH59B_RS25410 | - | 5743563..5744525 (-) | 963 | WP_016822455.1 | ABC transporter permease | - |
| ACH59B_RS25415 | - | 5744594..5746333 (-) | 1740 | WP_019689090.1 | ABC transporter substrate-binding protein | - |
| ACH59B_RS25420 | rpsR | 5746862..5747134 (-) | 273 | WP_013312800.1 | 30S ribosomal protein S18 | - |
| ACH59B_RS25425 | ssbA | 5747156..5747647 (-) | 492 | WP_010346813.1 | single-stranded DNA-binding protein | Machinery gene |
| ACH59B_RS25430 | rpsF | 5747697..5747981 (-) | 285 | WP_007433230.1 | 30S ribosomal protein S6 | - |
| ACH59B_RS25435 | - | 5748299..5748493 (+) | 195 | WP_013373906.1 | YjzC family protein | - |
| ACH59B_RS25440 | - | 5748860..5749177 (+) | 318 | WP_016822453.1 | hypothetical protein | - |
| ACH59B_RS25450 | - | 5749553..5749777 (-) | 225 | WP_016822452.1 | DUF951 domain-containing protein | - |
| ACH59B_RS25455 | - | 5749767..5750717 (-) | 951 | WP_019689092.1 | mechanosensitive ion channel family protein | - |
| ACH59B_RS25460 | yyaC | 5750968..5751570 (+) | 603 | WP_019689093.1 | spore protease YyaC | - |
| ACH59B_RS25465 | - | 5751524..5752045 (-) | 522 | WP_016822449.1 | DUF4446 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 17928.67 Da Isoelectric Point: 4.8369
>NTDB_id=1070218 ACH59B_RS25425 WP_010346813.1 5747156..5747647(-) (ssbA) [MAG: Paenibacillus sp. DP01]
MLNRVILIGRLTKDPELRYTPSGVAVTQFTLAVDRPFTSQGGEREADFLPIVTWRQLAETCANYLRKGRLTAVEGRVQVR
NYENNEGKRVYVTEIVADNVRFLESNRDSGNGGGNSGGGMREESPFGGGNSNSGRGNNNSRNNQDPFSDDGKPIDISDDD
LPF
MLNRVILIGRLTKDPELRYTPSGVAVTQFTLAVDRPFTSQGGEREADFLPIVTWRQLAETCANYLRKGRLTAVEGRVQVR
NYENNEGKRVYVTEIVADNVRFLESNRDSGNGGGNSGGGMREESPFGGGNSNSGRGNNNSRNNQDPFSDDGKPIDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=1070218 ACH59B_RS25425 WP_010346813.1 5747156..5747647(-) (ssbA) [MAG: Paenibacillus sp. DP01]
TTGTTGAACCGTGTCATTCTGATCGGTCGTTTGACCAAAGATCCAGAGCTGCGCTATACACCGTCTGGTGTAGCAGTAAC
CCAGTTCACCCTGGCTGTAGACCGTCCGTTTACAAGTCAAGGCGGCGAACGGGAAGCGGATTTCTTGCCGATCGTAACCT
GGCGTCAGCTTGCTGAAACATGCGCTAACTATCTTCGTAAAGGTCGTTTGACGGCTGTTGAAGGCCGTGTACAAGTGCGT
AATTATGAGAACAATGAAGGAAAACGTGTATACGTGACTGAAATTGTTGCTGATAATGTACGTTTCTTGGAATCTAACCG
CGATAGCGGCAACGGTGGCGGCAATAGCGGTGGAGGTATGCGTGAGGAGTCTCCTTTCGGAGGCGGTAACAGCAATAGTG
GGCGCGGGAATAATAACTCGCGAAACAATCAGGATCCTTTTTCCGATGACGGAAAACCGATCGATATTTCGGATGATGAT
CTACCATTTTAA
TTGTTGAACCGTGTCATTCTGATCGGTCGTTTGACCAAAGATCCAGAGCTGCGCTATACACCGTCTGGTGTAGCAGTAAC
CCAGTTCACCCTGGCTGTAGACCGTCCGTTTACAAGTCAAGGCGGCGAACGGGAAGCGGATTTCTTGCCGATCGTAACCT
GGCGTCAGCTTGCTGAAACATGCGCTAACTATCTTCGTAAAGGTCGTTTGACGGCTGTTGAAGGCCGTGTACAAGTGCGT
AATTATGAGAACAATGAAGGAAAACGTGTATACGTGACTGAAATTGTTGCTGATAATGTACGTTTCTTGGAATCTAACCG
CGATAGCGGCAACGGTGGCGGCAATAGCGGTGGAGGTATGCGTGAGGAGTCTCCTTTCGGAGGCGGTAACAGCAATAGTG
GGCGCGGGAATAATAACTCGCGAAACAATCAGGATCCTTTTTCCGATGACGGAAAACCGATCGATATTTCGGATGATGAT
CTACCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
60.116 |
100 |
0.638 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.292 |
100 |
0.528 |
| ssb | Neisseria meningitidis MC58 |
34.615 |
100 |
0.386 |
| ssb | Neisseria gonorrhoeae MS11 |
33.714 |
100 |
0.362 |