Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACIHQS_RS15260 | Genome accession | NZ_CP173025 |
| Coordinates | 3206176..3206754 (-) | Length | 192 a.a. |
| NCBI ID | WP_007482778.1 | Uniprot ID | G7GGC1 |
| Organism | Acinetobacter venetianus strain AVYS1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 3201176..3211754
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACIHQS_RS15245 (ACIHQS_15245) | gabT | 3201228..3202520 (-) | 1293 | WP_404229069.1 | 4-aminobutyrate--2-oxoglutarate transaminase | - |
| ACIHQS_RS15250 (ACIHQS_15250) | - | 3202675..3204174 (+) | 1500 | WP_404229072.1 | PLP-dependent aminotransferase family protein | - |
| ACIHQS_RS15255 (ACIHQS_15255) | - | 3204241..3205683 (-) | 1443 | WP_004877977.1 | amino acid permease | - |
| ACIHQS_RS15260 (ACIHQS_15260) | ssb | 3206176..3206754 (-) | 579 | WP_007482778.1 | single-stranded DNA-binding protein | Machinery gene |
| ACIHQS_RS15265 (ACIHQS_15265) | - | 3206807..3208171 (-) | 1365 | WP_061393068.1 | MFS transporter | - |
| ACIHQS_RS15270 (ACIHQS_15270) | - | 3208308..3209390 (-) | 1083 | WP_404229076.1 | DUF475 domain-containing protein | - |
| ACIHQS_RS15275 (ACIHQS_15275) | tenA | 3209562..3210230 (+) | 669 | WP_004877998.1 | thiaminase II | - |
| ACIHQS_RS15280 (ACIHQS_15280) | - | 3210340..3211074 (-) | 735 | WP_404229079.1 | hypothetical protein | - |
| ACIHQS_RS15285 (ACIHQS_15285) | - | 3211383..3211736 (-) | 354 | WP_004878002.1 | DUF1304 domain-containing protein | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 21224.89 Da Isoelectric Point: 6.4819
>NTDB_id=1070015 ACIHQS_RS15260 WP_007482778.1 3206176..3206754(-) (ssb) [Acinetobacter venetianus strain AVYS1]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYSTEIRGDQMQMLDSRQQGEQGFAGGNDFNQPRFNNNNSNQGGGYQNTGYNNNNQNGYGQQGGNY
AGSPQAGNGFNTPKSSPQPAAAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSESWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYSTEIRGDQMQMLDSRQQGEQGFAGGNDFNQPRFNNNNSNQGGGYQNTGYNNNNQNGYGQQGGNY
AGSPQAGNGFNTPKSSPQPAAAPADLDDDLPF
Nucleotide
Download Length: 579 bp
>NTDB_id=1070015 ACIHQS_RS15260 WP_007482778.1 3206176..3206754(-) (ssb) [Acinetobacter venetianus strain AVYS1]
ATGCGTGGTGTAAATAAAGTAATTTTAGTCGGAACTTTGGGCCGTGATCCTGAAACAAAAACTTTTCCAAATGGTGGATC
TTTAACCCAGTTTTCGATTGCAACAAGTGAGTCTTGGACAGATAAAAGCACGGGTGAACGTAAAGAACAAACGGAATGGC
ATCGTATCGTGTTGCACAACCGTTTAGGTGAAATTGCACAACAATATTTACGTAAAGGTTCGAAGGTTTATATCGAAGGT
TCATTGCGTACACGTCAATGGACAGACCAAAATGGTCAAGAGCGTTACAGCACGGAAATCCGTGGTGATCAAATGCAAAT
GCTTGATTCACGTCAACAAGGTGAGCAAGGTTTTGCTGGCGGTAACGACTTCAACCAACCGCGTTTTAATAACAACAATA
GTAATCAGGGCGGTGGTTACCAGAACACAGGTTATAACAACAATAATCAAAATGGTTATGGTCAACAAGGCGGTAACTAC
GCAGGTAGTCCACAAGCTGGAAATGGTTTTAATACACCTAAATCATCGCCACAGCCTGCGGCAGCACCAGCTGATTTAGA
TGATGATTTACCGTTCTAA
ATGCGTGGTGTAAATAAAGTAATTTTAGTCGGAACTTTGGGCCGTGATCCTGAAACAAAAACTTTTCCAAATGGTGGATC
TTTAACCCAGTTTTCGATTGCAACAAGTGAGTCTTGGACAGATAAAAGCACGGGTGAACGTAAAGAACAAACGGAATGGC
ATCGTATCGTGTTGCACAACCGTTTAGGTGAAATTGCACAACAATATTTACGTAAAGGTTCGAAGGTTTATATCGAAGGT
TCATTGCGTACACGTCAATGGACAGACCAAAATGGTCAAGAGCGTTACAGCACGGAAATCCGTGGTGATCAAATGCAAAT
GCTTGATTCACGTCAACAAGGTGAGCAAGGTTTTGCTGGCGGTAACGACTTCAACCAACCGCGTTTTAATAACAACAATA
GTAATCAGGGCGGTGGTTACCAGAACACAGGTTATAACAACAATAATCAAAATGGTTATGGTCAACAAGGCGGTAACTAC
GCAGGTAGTCCACAAGCTGGAAATGGTTTTAATACACCTAAATCATCGCCACAGCCTGCGGCAGCACCAGCTGATTTAGA
TGATGATTTACCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
51.98 |
100 |
0.547 |
| ssb | Vibrio cholerae strain A1552 |
44.335 |
100 |
0.469 |
| ssb | Neisseria meningitidis MC58 |
39.086 |
100 |
0.401 |
| ssb | Neisseria gonorrhoeae MS11 |
39.086 |
100 |
0.401 |