Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ACFELF_RS24740 | Genome accession | NZ_CP172851 |
| Coordinates | 5280683..5281219 (-) | Length | 178 a.a. |
| NCBI ID | WP_025921208.1 | Uniprot ID | Q8KQ36 |
| Organism | Pseudomonas aeruginosa strain 238637E_ID016 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 5275683..5286219
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFELF_RS24720 (ACFELF_24720) | - | 5276258..5278513 (-) | 2256 | WP_003104913.1 | DUF1631 domain-containing protein | - |
| ACFELF_RS24725 (ACFELF_24725) | nadC | 5278799..5279647 (+) | 849 | WP_017148538.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| ACFELF_RS24735 (ACFELF_24735) | tfpZ | 5279881..5280618 (-) | 738 | WP_023110409.1 | TfpX/TfpZ family type IV pilin accessory protein | - |
| ACFELF_RS24740 (ACFELF_24740) | pilE | 5280683..5281219 (-) | 537 | WP_025921208.1 | pilin | Machinery gene |
| ACFELF_RS24745 (ACFELF_24745) | pilB | 5281446..5283149 (+) | 1704 | WP_023100230.1 | type IV-A pilus assembly ATPase PilB | Machinery gene |
| ACFELF_RS24750 (ACFELF_24750) | pilC | 5283153..5284370 (+) | 1218 | WP_400523428.1 | type II secretion system F family protein | Machinery gene |
| ACFELF_RS24755 (ACFELF_24755) | pilD | 5284373..5285245 (+) | 873 | WP_017148550.1 | type IV prepilin peptidase/methyltransferase PilD | Machinery gene |
| ACFELF_RS24760 (ACFELF_24760) | coaE | 5285242..5285853 (+) | 612 | WP_400523431.1 | dephospho-CoA kinase | - |
| ACFELF_RS24765 (ACFELF_24765) | yacG | 5285850..5286050 (+) | 201 | WP_017148551.1 | DNA gyrase inhibitor YacG | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 18322.83 Da Isoelectric Point: 4.9984
>NTDB_id=1069246 ACFELF_RS24740 WP_025921208.1 5280683..5281219(-) (pilE) [Pseudomonas aeruginosa strain 238637E_ID016]
MKAQKGFTLIELMIVVAIIGILAAIALPAYQDYTVRTRVSEGLVLAEPAKLMISTDGSASTADLTRATTTWNQQSNNLGA
SSKYVTSVLMDAGNTGVITITYVADQVGLPTAGNTLILSPYINDGNTRTALATAVAAGTRGTIDWACTSASNATATAQGF
TGMAAGSVPQEFAPAQCR
MKAQKGFTLIELMIVVAIIGILAAIALPAYQDYTVRTRVSEGLVLAEPAKLMISTDGSASTADLTRATTTWNQQSNNLGA
SSKYVTSVLMDAGNTGVITITYVADQVGLPTAGNTLILSPYINDGNTRTALATAVAAGTRGTIDWACTSASNATATAQGF
TGMAAGSVPQEFAPAQCR
Nucleotide
Download Length: 537 bp
>NTDB_id=1069246 ACFELF_RS24740 WP_025921208.1 5280683..5281219(-) (pilE) [Pseudomonas aeruginosa strain 238637E_ID016]
ATGAAAGCTCAAAAAGGCTTCACTTTGATCGAGCTGATGATCGTTGTAGCGATCATCGGTATTCTGGCTGCGATTGCTCT
GCCGGCCTATCAGGACTACACCGTTCGTACCCGTGTCAGTGAAGGTCTGGTTCTGGCTGAGCCCGCCAAACTGATGATCT
CCACGGATGGAAGTGCTTCTACTGCTGATCTGACTCGCGCAACCACTACTTGGAACCAGCAATCCAATAATCTGGGTGCA
TCCAGTAAGTACGTAACATCTGTTTTGATGGATGCTGGTAACACCGGTGTTATCACTATTACGTATGTCGCTGACCAAGT
GGGCTTGCCGACTGCCGGTAACACTCTGATTCTGTCTCCCTATATCAATGATGGTAACACTCGCACTGCTCTGGCGACTG
CAGTGGCTGCTGGCACTCGTGGCACCATTGATTGGGCTTGCACTTCGGCATCGAACGCGACTGCCACTGCTCAGGGTTTC
ACCGGCATGGCAGCTGGTAGTGTGCCGCAAGAGTTTGCTCCTGCTCAGTGCCGCTAA
ATGAAAGCTCAAAAAGGCTTCACTTTGATCGAGCTGATGATCGTTGTAGCGATCATCGGTATTCTGGCTGCGATTGCTCT
GCCGGCCTATCAGGACTACACCGTTCGTACCCGTGTCAGTGAAGGTCTGGTTCTGGCTGAGCCCGCCAAACTGATGATCT
CCACGGATGGAAGTGCTTCTACTGCTGATCTGACTCGCGCAACCACTACTTGGAACCAGCAATCCAATAATCTGGGTGCA
TCCAGTAAGTACGTAACATCTGTTTTGATGGATGCTGGTAACACCGGTGTTATCACTATTACGTATGTCGCTGACCAAGT
GGGCTTGCCGACTGCCGGTAACACTCTGATTCTGTCTCCCTATATCAATGATGGTAACACTCGCACTGCTCTGGCGACTG
CAGTGGCTGCTGGCACTCGTGGCACCATTGATTGGGCTTGCACTTCGGCATCGAACGCGACTGCCACTGCTCAGGGTTTC
ACCGGCATGGCAGCTGGTAGTGTGCCGCAAGAGTTTGCTCCTGCTCAGTGCCGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Neisseria elongata subsp. glycolytica ATCC 29315 |
43.719 |
100 |
0.489 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
40.556 |
100 |
0.41 |
| pilA2 | Legionella pneumophila strain ERS1305867 |
40.341 |
98.876 |
0.399 |
| pilA2 | Legionella pneumophila str. Paris |
39.773 |
98.876 |
0.393 |