Detailed information
Bioinformatically predicted
Overview
| Name | cipB | Type | Regulator |
| Locus tag | ACF1RT_RS01460 | Genome accession | NZ_CP172847 |
| Coordinates | 291227..291457 (+) | Length | 76 a.a. |
| NCBI ID | WP_002265368.1 | Uniprot ID | Q8DS95 |
| Organism | Streptococcus mutans strain DPC6143 | ||
| Function | indirect induction of ComX; activation of comRS system (predicted from homology) Competence regulation |
||
Genomic Context
Location: 286227..296457
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACF1RT_RS01435 (ACF1RT_01435) | - | 286822..287448 (+) | 627 | WP_002268642.1 | hypothetical protein | - |
| ACF1RT_RS01440 (ACF1RT_01440) | - | 287496..288134 (+) | 639 | WP_002271525.1 | VTT domain-containing protein | - |
| ACF1RT_RS01445 (ACF1RT_01445) | comE/blpR | 288605..289360 (+) | 756 | WP_226711110.1 | response regulator transcription factor | Regulator |
| ACF1RT_RS01450 (ACF1RT_01450) | comD/blpH | 289353..290678 (+) | 1326 | WP_400260324.1 | sensor histidine kinase | Regulator |
| ACF1RT_RS01455 (ACF1RT_01455) | comC/blpC | 290820..290960 (-) | 141 | WP_002267610.1 | ComC/BlpC family leader-containing pheromone/bacteriocin | Regulator |
| ACF1RT_RS01460 (ACF1RT_01460) | cipB | 291227..291457 (+) | 231 | WP_002265368.1 | Blp family class II bacteriocin | Regulator |
| ACF1RT_RS01465 (ACF1RT_01465) | - | 291588..291989 (+) | 402 | WP_002310604.1 | hypothetical protein | - |
| ACF1RT_RS01470 (ACF1RT_01470) | - | 293370..293789 (+) | 420 | WP_002263913.1 | hypothetical protein | - |
| ACF1RT_RS01475 (ACF1RT_01475) | - | 293936..294340 (+) | 405 | WP_002263912.1 | hypothetical protein | - |
| ACF1RT_RS01480 (ACF1RT_01480) | - | 294463..294675 (-) | 213 | Protein_267 | IS3 family transposase | - |
| ACF1RT_RS01485 (ACF1RT_01485) | - | 295115..295279 (+) | 165 | WP_002265308.1 | hypothetical protein | - |
| ACF1RT_RS01490 (ACF1RT_01490) | - | 295663..295875 (+) | 213 | WP_002263744.1 | Blp family class II bacteriocin | - |
| ACF1RT_RS01495 (ACF1RT_01495) | - | 296039..296227 (+) | 189 | WP_400260325.1 | Blp family class II bacteriocin | - |
Sequence
Protein
Download Length: 76 a.a. Molecular weight: 7262.08 Da Isoelectric Point: 3.7781
>NTDB_id=1069070 ACF1RT_RS01460 WP_002265368.1 291227..291457(+) (cipB) [Streptococcus mutans strain DPC6143]
MNTQAFEQFNVMDNEALSAVEGGGRGWNCAAGIALGAGQGYMATAGGTAFLGPYAIGTGAFGAIAGGIGGALNSCG
MNTQAFEQFNVMDNEALSAVEGGGRGWNCAAGIALGAGQGYMATAGGTAFLGPYAIGTGAFGAIAGGIGGALNSCG
Nucleotide
Download Length: 231 bp
>NTDB_id=1069070 ACF1RT_RS01460 WP_002265368.1 291227..291457(+) (cipB) [Streptococcus mutans strain DPC6143]
ATGAATACACAAGCATTTGAACAATTTAACGTAATGGATAATGAAGCACTTTCAGCTGTTGAAGGTGGGGGCCGCGGATG
GAATTGTGCAGCAGGTATTGCTCTAGGTGCTGGGCAAGGTTATATGGCTACTGCAGGCGGTACAGCATTTCTTGGTCCAT
ATGCTATTGGCACTGGTGCCTTTGGGGCTATTGCTGGAGGAATCGGAGGAGCTCTTAATTCCTGTGGTTAG
ATGAATACACAAGCATTTGAACAATTTAACGTAATGGATAATGAAGCACTTTCAGCTGTTGAAGGTGGGGGCCGCGGATG
GAATTGTGCAGCAGGTATTGCTCTAGGTGCTGGGCAAGGTTATATGGCTACTGCAGGCGGTACAGCATTTCTTGGTCCAT
ATGCTATTGGCACTGGTGCCTTTGGGGCTATTGCTGGAGGAATCGGAGGAGCTCTTAATTCCTGTGGTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| cipB | Streptococcus mutans UA159 |
100 |
100 |
1 |