Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | ACFIOA_RS05190 | Genome accession | NZ_CP172783 |
| Coordinates | 1162187..1162693 (-) | Length | 168 a.a. |
| NCBI ID | WP_015856526.1 | Uniprot ID | A0A336NDS4 |
| Organism | Bartonella grahamii strain qr01 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1157187..1167693
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACFIOA_RS05170 (ACFIOA_05170) | - | 1157515..1158027 (-) | 513 | WP_375624002.1 | peptidylprolyl isomerase | - |
| ACFIOA_RS05175 (ACFIOA_05175) | - | 1158046..1158639 (-) | 594 | WP_375624004.1 | peptidylprolyl isomerase | - |
| ACFIOA_RS05180 (ACFIOA_05180) | coaD | 1158629..1159148 (-) | 520 | Protein_1008 | pantetheine-phosphate adenylyltransferase | - |
| ACFIOA_RS05185 (ACFIOA_05185) | gyrA | 1159173..1161956 (-) | 2784 | WP_375624006.1 | DNA gyrase subunit A | - |
| ACFIOA_RS05190 (ACFIOA_05190) | ssb | 1162187..1162693 (-) | 507 | WP_015856526.1 | single-stranded DNA-binding protein | Machinery gene |
| ACFIOA_RS05195 (ACFIOA_05195) | uvrA | 1163025..1165940 (+) | 2916 | WP_375624008.1 | excinuclease ABC subunit UvrA | - |
| ACFIOA_RS05200 (ACFIOA_05200) | - | 1166780..1167118 (+) | 339 | WP_375624010.1 | P-II family nitrogen regulator | - |
Sequence
Protein
Download Length: 168 a.a. Molecular weight: 18838.65 Da Isoelectric Point: 6.4875
>NTDB_id=1068931 ACFIOA_RS05190 WP_015856526.1 1162187..1162693(-) (ssb) [Bartonella grahamii strain qr01]
MAGSLNKVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTEWHNIVIFNENLVKVAEQYLKKGSKIYI
EGQLQTRKWQDQNGNDRYTTEVVLQKYRGELQMLDGRGAAGGEQGASQGGSYSGGFADSNSNQRNTFGQNNNQLGESFSH
KLDDDVPF
MAGSLNKVILIGNLGADPEIRRLNSGDQVANLRIATSESWRDRNTNERKERTEWHNIVIFNENLVKVAEQYLKKGSKIYI
EGQLQTRKWQDQNGNDRYTTEVVLQKYRGELQMLDGRGAAGGEQGASQGGSYSGGFADSNSNQRNTFGQNNNQLGESFSH
KLDDDVPF
Nucleotide
Download Length: 507 bp
>NTDB_id=1068931 ACFIOA_RS05190 WP_015856526.1 1162187..1162693(-) (ssb) [Bartonella grahamii strain qr01]
ATGGCTGGTAGCCTTAATAAAGTTATTTTGATTGGTAATCTTGGTGCGGATCCTGAAATCCGCCGTTTGAATTCTGGTGA
TCAAGTGGCAAATTTGCGTATTGCTACTTCAGAAAGTTGGCGTGATCGGAATACAAATGAGCGAAAAGAACGCACTGAGT
GGCATAATATTGTTATTTTTAATGAAAACCTTGTCAAAGTTGCAGAGCAATATTTAAAAAAAGGCAGCAAAATTTATATT
GAGGGGCAGTTACAGACACGAAAATGGCAAGATCAAAATGGAAATGACCGTTATACAACAGAGGTTGTTTTGCAAAAGTA
CCGTGGCGAATTACAAATGCTTGATGGCCGGGGAGCAGCGGGCGGGGAGCAAGGAGCAAGTCAAGGGGGGAGTTATAGTG
GTGGTTTTGCCGATAGTAACTCAAATCAGAGAAATACTTTTGGTCAAAATAATAATCAATTAGGAGAAAGCTTTTCACAT
AAATTAGATGATGACGTACCTTTTTAA
ATGGCTGGTAGCCTTAATAAAGTTATTTTGATTGGTAATCTTGGTGCGGATCCTGAAATCCGCCGTTTGAATTCTGGTGA
TCAAGTGGCAAATTTGCGTATTGCTACTTCAGAAAGTTGGCGTGATCGGAATACAAATGAGCGAAAAGAACGCACTGAGT
GGCATAATATTGTTATTTTTAATGAAAACCTTGTCAAAGTTGCAGAGCAATATTTAAAAAAAGGCAGCAAAATTTATATT
GAGGGGCAGTTACAGACACGAAAATGGCAAGATCAAAATGGAAATGACCGTTATACAACAGAGGTTGTTTTGCAAAAGTA
CCGTGGCGAATTACAAATGCTTGATGGCCGGGGAGCAGCGGGCGGGGAGCAAGGAGCAAGTCAAGGGGGGAGTTATAGTG
GTGGTTTTGCCGATAGTAACTCAAATCAGAGAAATACTTTTGGTCAAAATAATAATCAATTAGGAGAAAGCTTTTCACAT
AAATTAGATGATGACGTACCTTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
48.936 |
100 |
0.548 |
| ssb | Vibrio cholerae strain A1552 |
50.286 |
100 |
0.524 |
| ssb | Neisseria meningitidis MC58 |
38.378 |
100 |
0.423 |
| ssb | Neisseria gonorrhoeae MS11 |
38.378 |
100 |
0.423 |