Detailed information NTG1067796

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: ACH9XF_RS14940
• Genome accession: NZ_CP172436
• Coordinates: 3224379..3225437 (-)
• Length: 352 a.a.
• NCBI ID: WP_005410860.1
• Uniprot ID: A0A854DVP1
• Organism: Stenotrophomonas maltophilia strain SM1053
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3219379..3230437

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACH9XF_RS14920	-	3220317..3222284 (-)	1968	WP_005410855.1	type IV pilus secretin PilQ	-
ACH9XF_RS14925	-	3222306..3222809 (-)	504	WP_044571441.1	pilus assembly protein PilP	-
ACH9XF_RS14930	-	3222836..3223492 (-)	657	WP_005410857.1	type 4a pilus biogenesis protein PilO	-
ACH9XF_RS14935	-	3223489..3224379 (-)	891	WP_049404031.1	PilN domain-containing protein	-
ACH9XF_RS14940	pilM	3224379..3225437 (-)	1059	WP_005410860.1	pilus assembly protein PilM	Machinery gene
ACH9XF_RS14945	-	3225657..3228080 (+)	2424	WP_111108997.1	penicillin-binding protein 1A	-
ACH9XF_RS14950	-	3228311..3228955 (+)	645	WP_006466035.1	hypothetical protein	-
ACH9XF_RS14955	-	3229086..3229490 (-)	405	WP_239502980.1	hypothetical protein	-
ACH9XF_RS14960	-	3229492..3229830 (-)	339	Protein_2919	usher protein	-
ACH9XF_RS14965	-	3229891..3230379 (-)	489	WP_049404061.1	CS1 type fimbrial major subunit	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 37739.38 Da
• Isoelectric Point: 4.4047

>NTDB_id=1067796 ACH9XF_RS14940 WP_005410860.1 3224379..3225437(-) (pilM) [Stenotrophomonas maltophilia strain SM1053]
MGLIPKSQSPLVGVDISSTAVKLLQLSRSGNRFRVEHYAVEPLPPNAVVEKNIVEVEAVGEAIRRAMNRSGSKAKLAAAA
VAGSAVITKVIPMPAELDENDMEAQIELEAVNYIPYPIEEVNLDFEVIGAIPNNPEMVQVLLAASRSENVELRQSALELG
GLQAKVMDVEAFAVENAYALVASELPVSIDGVVALVDIGATMTTLNVLRGGRSLYSREQVFGGKQLTDEIMRRYGLSYEE
AGLAKRQGGLPESYEMEVLEPFKEATVQQISRLLQFFYAGSEFNRVDHIVLAGGCAVLGGLPEMVEEQLGVPTVVANPLA
QMTLGPKVNAHALAQDAPALMIATGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=1067796 ACH9XF_RS14940 WP_005410860.1 3224379..3225437(-) (pilM) [Stenotrophomonas maltophilia strain SM1053]
GTGGGGCTCATCCCAAAAAGTCAGTCGCCGCTTGTAGGCGTCGACATCAGTTCGACTGCGGTAAAGCTTTTGCAGCTGTC
CCGCAGTGGCAACCGTTTTCGTGTGGAACATTACGCCGTGGAACCTCTTCCGCCGAACGCGGTGGTGGAGAAGAACATCG
TGGAAGTGGAGGCCGTGGGTGAGGCCATCCGCCGTGCGATGAACCGCTCGGGGAGCAAGGCCAAGCTGGCCGCTGCCGCC
GTCGCCGGTTCGGCGGTGATCACCAAGGTGATCCCGATGCCGGCCGAGCTCGACGAGAACGACATGGAAGCCCAGATCGA
GCTGGAAGCGGTCAACTACATTCCGTACCCGATCGAGGAAGTGAACCTGGACTTCGAGGTGATCGGGGCGATCCCGAACA
ACCCGGAGATGGTCCAGGTGCTGCTGGCCGCGTCGCGTTCGGAGAACGTGGAACTGCGCCAGTCGGCATTGGAGCTGGGG
GGCCTGCAGGCCAAGGTGATGGACGTGGAGGCGTTCGCGGTCGAGAACGCCTACGCCCTGGTCGCCAGCGAGCTGCCGGT
GTCCATCGACGGCGTGGTCGCGCTGGTCGATATCGGCGCCACCATGACCACCCTCAACGTCCTGCGCGGCGGCCGCAGCC
TGTACAGCCGCGAACAGGTGTTCGGTGGCAAGCAGCTGACCGACGAGATCATGCGCCGTTACGGACTGAGCTACGAGGAG
GCCGGCCTGGCCAAGCGCCAGGGCGGGCTGCCGGAAAGCTACGAGATGGAAGTGCTGGAGCCGTTCAAGGAAGCTACGGT
CCAGCAGATCAGCCGCCTGCTGCAGTTCTTCTATGCAGGCAGTGAGTTCAACCGCGTTGATCACATCGTGCTGGCCGGCG
GCTGCGCCGTGCTGGGTGGCCTGCCGGAGATGGTCGAGGAACAGCTGGGCGTGCCGACCGTGGTCGCCAATCCGCTGGCA
CAGATGACCCTGGGCCCGAAGGTGAACGCACATGCGCTGGCCCAGGATGCCCCCGCGCTGATGATCGCCACCGGTCTGGC
GCTGAGGAGCTTCGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (13-351)

3D structure

• AlphaFold DB: A0A854DVP1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	51.136	100	0.511
comM	Acinetobacter nosocomialis M2	51.136	100	0.511
comM	Acinetobacter baylyi ADP1	50	100	0.5
pilM	Legionella pneumophila strain ERS1305867	47.863	99.716	0.477