Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   ACFSN5_RS02525 Genome accession   NZ_CP172427
Coordinates   515015..515824 (+) Length   269 a.a.
NCBI ID   WP_165209776.1    Uniprot ID   -
Organism   Streptococcus sp. ZJ 1593     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 510015..520824
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACFSN5_RS02500 (ACFSN5_02500) - 510417..511121 (-) 705 WP_165209144.1 amino acid ABC transporter permease -
  ACFSN5_RS02505 (ACFSN5_02505) - 511139..511960 (-) 822 WP_165209147.1 transporter substrate-binding domain-containing protein -
  ACFSN5_RS02510 (ACFSN5_02510) - 511974..512738 (-) 765 WP_165209150.1 amino acid ABC transporter ATP-binding protein -
  ACFSN5_RS02515 (ACFSN5_02515) vicR 512961..513668 (+) 708 WP_165209779.1 response regulator YycF Regulator
  ACFSN5_RS02520 (ACFSN5_02520) vicK 513661..515025 (+) 1365 WP_165209153.1 cell wall metabolism sensor histidine kinase VicK Regulator
  ACFSN5_RS02525 (ACFSN5_02525) vicX 515015..515824 (+) 810 WP_165209776.1 MBL fold metallo-hydrolase Regulator
  ACFSN5_RS02530 (ACFSN5_02530) - 515927..517366 (-) 1440 WP_165209156.1 TrkH family potassium uptake protein -
  ACFSN5_RS02535 (ACFSN5_02535) trkA 517377..518726 (-) 1350 WP_004225985.1 Trk system potassium transporter TrkA -
  ACFSN5_RS02540 (ACFSN5_02540) - 519248..519796 (+) 549 WP_165209782.1 tRNA (cytidine(34)-2'-O)-methyltransferase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30213.31 Da        Isoelectric Point: 6.3683

>NTDB_id=1067661 ACFSN5_RS02525 WP_165209776.1 515015..515824(+) (vicX) [Streptococcus sp. ZJ 1593]
MTNKGFKYSILASGSSGNSFYLETPKKKLLIDAGLSGKKITSLLAEIDRKPEDLDAILVTHEHKDHIHGVGVLARKYGLP
IYANKKTWQTMDAHNMIGKIDPEQKHIFERGKVVTFGDIDIESFGVSHDAVDPQFYRFMKDDKSFVMLTDTGYVSDRMAA
LIENADGYLIESNHDIEILRSGAYPWSLKQRILSDKGHLSNEDGSETMIRTIGNRTKKIYLGHLSKENNIKELAHMTMEN
NLIQADFGVGHDFKILDTSPDEATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1067661 ACFSN5_RS02525 WP_165209776.1 515015..515824(+) (vicX) [Streptococcus sp. ZJ 1593]
ATGACCAATAAAGGTTTTAAATATAGTATTTTAGCATCGGGTTCCTCAGGGAACTCCTTTTACTTGGAAACTCCCAAGAA
GAAGCTCTTGATTGATGCAGGCCTTTCAGGAAAGAAGATTACCAGTCTTCTGGCTGAAATTGACCGTAAACCTGAAGATT
TGGATGCTATATTAGTTACCCATGAGCATAAAGACCATATCCACGGTGTTGGTGTTTTGGCTCGAAAGTATGGACTGCCT
ATCTATGCTAATAAAAAAACTTGGCAGACCATGGATGCTCACAATATGATTGGTAAGATTGACCCAGAGCAGAAACATAT
TTTTGAGCGGGGTAAGGTCGTGACCTTTGGCGATATTGATATTGAGAGTTTTGGTGTCAGTCATGATGCCGTTGATCCTC
AATTCTACCGCTTTATGAAAGACGACAAGAGTTTTGTTATGCTGACAGATACGGGTTATGTCAGTGATCGGATGGCAGCT
CTGATTGAAAATGCGGATGGTTATCTGATTGAGTCCAATCACGATATCGAAATCCTACGCTCAGGTGCCTATCCTTGGAG
TCTTAAACAGCGAATCTTATCGGATAAGGGTCACCTCTCTAATGAGGATGGCTCTGAAACCATGATTCGCACCATTGGCA
ATCGGACCAAGAAGATTTATCTGGGCCATCTCAGTAAGGAGAATAATATCAAGGAATTGGCCCACATGACTATGGAAAAC
AACCTGATTCAGGCTGATTTTGGTGTTGGTCATGACTTTAAAATCTTAGATACCTCGCCGGATGAGGCTACCCCGCTGAC
GGATATATAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(29-205)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

81.413

100

0.814

Multiple sequence alignment